9FPM | pdb_00009fpm

Crystal structure of the Tin2-fold effector protein Tue1 from Thecaphora thlaspeos


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 
    0.216 (Depositor), 0.216 (DCC) 
  • R-Value Work: 
    0.179 (Depositor), 0.179 (DCC) 
  • R-Value Observed: 
    0.181 (Depositor) 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Jasmonic acid signalling is targeted by a smut fungal Tin2-fold effector.

Gul, S.Mendoza-Rojas, G.Heinen, M.Hessler, N.Galle, S.Zeier, J.Smits, S.H.J.Altegoer, F.Gohre, V.

(2025) J Exp Bot 

  • DOI: https://doi.org/10.1093/jxb/eraf381
  • Primary Citation of Related Structures:  
    9FPM

  • PubMed Abstract: 

    In plants, jasmonate signaling is a hub integrating environmental cues with growth and development. Due to its role in balancing defense responses against pathogens, it is a target of effector proteins from various pathogens. Here, we characterized the fungal effector protein Tue1 from the Brassicaceae smut fungus Thecaphora thlaspeos. T. thlaspeos naturally infects Arabis hirsuta but can also colonize the non-host Arabidopsis thaliana. In planta, the fungal protein Tue1 hijacks the plant importin-α dependent nuclear transporter to reach the plant nucleus. We demonstrate that Tue1 interacts with jasmonate ZIM domain 10 (JAZ10) proteins of both A. thaliana and Ar. hirsuta. Structure-guided analysis of Tue1 suggests that it binds the Jas motif of JAZ10 indicating a role in stabilization or binding competition with proteins like MYC3 and COI1. This is further supported by reduced jasmonate levels upon tue1 overexpression in A. thaliana and differential regulation of a subset of jasmonate-responsive genes during T. thlaspeos infection of A. hirsuta. Tue1 is part of the Tin2-fold effector family that was recently described in the corn smut Ustilago maydis. Our study further demonstrates that this structural effector family is expanded across smut fungal species, although future studies have to reveal whether targeting JAZ-repressors is a conserved mechanism or specifically acquired as an adaptation to its perennial host.


  • Organizational Affiliation
    • Institute of Microbiology, Cluster of Excellence on Plant Sciences, Heinrich-Heine University Düsseldorf, 40225 Düsseldorf, Germany.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Tue1279Thecaphora thlaspeosMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free:  0.216 (Depositor), 0.216 (DCC) 
  • R-Value Work:  0.179 (Depositor), 0.179 (DCC) 
  • R-Value Observed: 0.181 (Depositor) 
Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 38.05α = 114.53
b = 38.44β = 88.61
c = 39.47γ = 119.66
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
Cootmodel building

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany458090666

Revision History  (Full details and data files)

  • Version 1.0: 2025-06-25
    Type: Initial release
  • Version 1.1: 2025-09-17
    Changes: Database references