HUMAN CYCLOPHILIN D IN COMPLEX WITH INHIBITOR
Graedler, U.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidyl-prolyl cis-trans isomerase F, mitochondrial | 164 | Homo sapiens | Mutation(s): 1  Gene Names: PPIF, CYP3 EC: 5.2.1.8 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P30405 (Homo sapiens) Explore P30405  Go to UniProtKB:  P30405 | |||||
PHAROS:  P30405 GTEx:  ENSG00000108179  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P30405 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1JG4 (Subject of Investigation/LOI) Query on A1JG4 | B [auth A] | ~{N}'-cyclopentyl-~{N}-[2-[(1~{R},9~{R},10~{S})-10-oxidanyl-12-oxa-8-azatricyclo[7.3.1.0^{2,7}]trideca-2(7),3,5-trien-4-yl]ethyl]ethanediamide C20 H27 N3 O4 TWJNDXFEOOUBGG-KZNAEPCWSA-N | |||
PG4 Query on PG4 | D [auth A] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
PGE Query on PGE | C [auth A] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
SO4 Query on SO4 | E [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
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a = 57.039 | α = 90 |
b = 57.039 | β = 90 |
c = 114.404 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |