9UGC | pdb_00009ugc

Cryo-EM structure of the Pma1 with ordered N-terminal extension in the autoinhibited state

PDB DOI: https://doi.org/10.2210/pdb9UGC/pdb
EM Map EMD-64136: EMDB EMDataResource

Classification: PROTON TRANSPORT
Organism(s): Saccharomyces cerevisiae S288C
Mutation(s): No

Deposited: 2025-04-11 Released: 2025-06-04
Deposition Author(s): You, Z.L., Bai, L.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM structure of the Pma1 with ordered N-terminal extension in the autoinhibited state

You, Z.L., Bai, L.

To be published.

Macromolecule Content

Total Structure Weight: 199.43 kDa
Atom Count: 6,606
Modeled Residue Count: 860
Deposited Residue Count: 1,836
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Plasma membrane ATPase 1	A, B	918	Saccharomyces cerevisiae S288C	Mutation(s): 0 EC: 7.1.2.1
UniProt
Find proteins for P05030 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P05030 Go to UniProtKB: P05030
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P05030
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.20.1_4487

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-06-04

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32171212

Revision History (Full details and data files)

Version 1.0: 2025-06-04
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.