AF_AFA0A023IKK2F1

COMPUTED STRUCTURE MODEL OF MHC CLASS II BETA CHAIN

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain.

• AlphaFold DB: AF-A0A023IKK2-F1
• Released in AlphaFold DB:  2021-07-01
  Last Modified in AlphaFold DB: 2022-09-30
• Organism(s): Rattus norvegicus
• UniProtKB: A0A023IKK2

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Model Confidence 

• pLDDT (global): 84.85
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 32.22 kDa 
• Atom Count: 2,261 
• Modeled Residue Count: 287 
• Deposited Residue Count: 287 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
MHC class II beta chain	A	287	Rattus norvegicus	Mutation(s): 0  Gene Names: RT1-Db2
UniProt
Find proteins for A0A023IKK2 (Rattus norvegicus) Explore A0A023IKK2  Go to UniProtKB:  A0A023IKK2