AF_AFA1B9F5F1

COMPUTED STRUCTURE MODEL OF DNA LIGASE

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain.

• AlphaFold DB: AF-A1B9F5-F1
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2022-09-30
• Organism(s): Paracoccus denitrificans PD1222
• UniProtKB: A1B9F5

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Model Confidence 

• pLDDT (global): 89.39
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 81.99 kDa 
• Atom Count: 5,770 
• Modeled Residue Count: 765 
• Deposited Residue Count: 765 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA ligase	A	765	Paracoccus denitrificans PD1222	Mutation(s): 0  Gene Names: ligA EC: 6.5.1.2
UniProt
Find proteins for A1B9F5 (Paracoccus denitrificans (strain Pd 1222)) Explore A1B9F5  Go to UniProtKB:  A1B9F5