8S4L | pdb_00008s4l

NMR structure of orfamide A in micellar DPC solution

• PDB DOI: https://doi.org/10.2210/pdb8S4L/pdb

• Classification: SURFACTANT PROTEIN
• Organism(s): Pseudomonas protegens Pf-5
• Mutation(s): No 


• Deposited: 2024-02-21 Released: 2025-02-26 
• Deposition Author(s): Kovacs, B., Geudens, N., Martins, J.C.
• Funding Organization(s): Research Foundation - Flanders (FWO)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 11 
• Selection Criteria: structures with the lowest energy 

Literature

NMR structure of orfamide A in micellar DPC solution

Kovacs, B., Geudens, N., Martins, J.C.

To be published.

Biological Assembly 1  

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content 

• Total Structure Weight: 1.33 kDa 
• Atom Count: 91 
• Modeled Residue Count: 10 
• Deposited Residue Count: 10 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
orfamide A	A	10	Pseudomonas protegens Pf-5	Mutation(s): 0

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
FTT	B [auth A]	3-HYDROXY-TETRADECANOIC ACID C14 H28 O3 ATRNZOYKSNPPBF-CYBMUJFWSA-N

Biologically Interesting Molecules (External Reference) 1 Unique

Entity ID: 1
ID	Chains	Name	Type/Class	2D Diagram	3D Interactions
PRD_002561	A	Orfamide A	Lipopeptide /

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 11 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-02-26 
Deposition Author(s): Kovacs, B., Geudens, N., Martins, J.C.

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Funding Organization	Location	Grant Number
Research Foundation - Flanders (FWO)	Belgium	EOS project G0G3118N (EOS ID 30650620)

Revision History  

• Version 1.0: 2025-02-26
  Type: Initial release