2V4D | pdb_00002v4d

Re-refinement of MexA adaptor protein


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
MSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
MSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
LSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
LSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
KSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
KSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2B (2022-06-29)
BSCOP2 FamilyHlyD-like secretion proteins 8028933 4003003 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyHlyD C-terminal domain-like 8092210 3002572 SCOP2 (2022-06-29)
BSCOP2 SuperfamilySingle hybrid motif 8055550 3001880 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySingle hybrid motif 8055550 3001880 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHlyD beta-barrel domain-like 8041312 3002000 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EPRK15030_2nde2v4dE9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
EHlyD_D23_C_1e2v4dE11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
EPRK15030_1ste2v4dE10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
EHlyD_1ste2v4dE8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
MPRK15030_2nde2v4dM9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
MHlyD_D23_C_1e2v4dM11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
MPRK15030_1ste2v4dM10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
MHlyD_1ste2v4dM8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
LPRK15030_2nde2v4dL9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
LHlyD_D23_C_1e2v4dL11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
LPRK15030_1ste2v4dL10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
LHlyD_1ste2v4dL8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
KPRK15030_2nde2v4dK9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
KHlyD_D23_C_1e2v4dK11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
KPRK15030_1ste2v4dK10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
KHlyD_1ste2v4dK8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
JPRK15030_2nde2v4dJ9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
JHlyD_D23_C_1e2v4dJ11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
JPRK15030_1ste2v4dJ10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
JHlyD_1ste2v4dJ8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
IPRK15030_2nde2v4dI9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
IHlyD_D23_C_1e2v4dI11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
IPRK15030_1ste2v4dI10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
IHlyD_1ste2v4dI8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
HPRK15030_2nde2v4dH9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
HHlyD_D23_C_1e2v4dH11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
HPRK15030_1ste2v4dH10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
HHlyD_1ste2v4dH8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
GPRK15030_2nde2v4dG9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
GHlyD_D23_C_1e2v4dG11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
GPRK15030_1ste2v4dG10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
GHlyD_1ste2v4dG8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
FPRK15030_2nde2v4dF9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
FHlyD_D23_C_1e2v4dF11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
FPRK15030_1ste2v4dF10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
FHlyD_1ste2v4dF8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
DHlyD_D23_C_1e2v4dD4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
DPRK15030_1ste2v4dD5 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
DHlyD_1ste2v4dD6 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
CPRK15030_2nde2v4dC9 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
CHlyD_D23_C_1e2v4dC11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
CPRK15030_1ste2v4dC10 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
CHlyD_1ste2v4dC8 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
BPRK15030_2nde2v4dB5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PRK15030_2ndECOD (1.6)
BHlyD_D23_C_1e2v4dB7 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
BPRK15030_1ste2v4dB6 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
BHlyD_1ste2v4dB4 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)
AHlyD_D23_C_1e2v4dA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_C_1ECOD (1.6)
APRK15030_1ste2v4dA2 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: PRK15030_1stECOD (1.6)
AHlyD_1ste2v4dA3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: HlyD_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
E2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
E2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
E1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
M2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
M2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
M2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
M1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
L2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
L2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
L2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
L1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
K2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
K2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
K2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
K1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
J2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
J2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
J2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
J1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
I2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
I2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
I2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
I1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
H2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
H2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
H2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
H1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
G2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
G2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
G2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
G1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
F2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
F2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
F2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
F1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
D2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
D2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
D1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
C2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
C2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
C2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
C1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
B2.40.420.20 Mainly Beta Beta Barrel conserved putative lor/sdh protein from methanococcus maripaludis s2 fold CATH (4.3.0)
B2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
B2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
B1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
A2.40.30.170 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
A2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
A1.10.287.470 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF16576Barrel-sandwich domain of CusB or HlyD membrane-fusion (HlyD_D23)Barrel-sandwich domain of CusB or HlyD membrane-fusionThis entry represents a domain comprising the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD. It is formed by a barrel-sandwich domain which is inserted in a RIFT-like domain. The barrel-sandwich domain, itself, contains an in ...This entry represents a domain comprising the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD. It is formed by a barrel-sandwich domain which is inserted in a RIFT-like domain. The barrel-sandwich domain, itself, contains an insert of a three-helical bundle subdomain. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.
Domain

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InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR051160Membrane Fusion Protein (MFP) EffluxFamily
A, B, C, D, E
IPR006143RND efflux pump, membrane fusion proteinFamily
A, B, C, D, E
IPR032317RND efflux pump, membrane fusion protein, barrel-sandwich domainDomain
A, B, C, D, E
IPR043602Cation efflux system protein CusB-like, domain 1Domain