3ALO | pdb_00003alo

Crystal structure of human non-phosphorylated MKK4 kinase domain ternary complex with AMP-PNP and p38 peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Protein kinase-like (PK-like)	8069163	3000066	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Pkinase_Tyr	e3aloA1	A: a+b complex topology	X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: Pkinase_Tyr	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1	CATH (4.3.0)
A	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Dual specificity mitogen-activated protein kinase kinase 4	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine/threonine kinase activity MAP kinase kinase activity protein serine/threonine/tyrosine kinase activity molecular adaptor activity JUN kinase kinase activity protein serine kinase activity protein tyrosine kinase activity	cellular response to stimulus response to stimulus response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular process cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus intrinsic apoptotic signaling pathway in response to oxidative stress regulation of cellular process signaling programmed cell death in response to reactive oxygen species cellular response to stimulus response to stimulus response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular process cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus intrinsic apoptotic signaling pathway in response to oxidative stress regulation of cellular process signaling programmed cell death in response to reactive oxygen species cellular response to oxidative stress cellular response to chemical stress intracellular signal transduction cell communication cellular response to reactive oxygen species hydrogen peroxide-mediated programmed cell death cellular response to stress response to stress signal transduction intrinsic apoptotic signaling pathway regulation of biological process biological regulation response to oxygen-containing compound intrinsic apoptotic signaling pathway in response to hydrogen peroxide cell death cellular response to oxygen-containing compound response to reactive oxygen species apoptotic signaling pathway response to oxidative stress cellular response to chemical stimulus response to chemical apoptotic process programmed cell death JNK cascade intracellular signaling cassette MAPK cascade response to wounding immune response-regulating cell surface receptor signaling pathway cell surface receptor signaling pathway immune response Fc receptor signaling pathway immune response-regulating signaling pathway regulation of response to stimulus immune system process Fc-epsilon receptor signaling pathway regulation of immune response regulation of immune system process muscle cell apoptotic process smooth muscle cell apoptotic process cellular senescence neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death motor neuron apoptotic process regulation of motor neuron apoptotic process negative regulation of apoptotic process negative regulation of cellular process negative regulation of motor neuron apoptotic process regulation of neuron apoptotic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
B [auth E]	p38 peptide	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR000719	Protein kinase domain	Domain
A	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P45985	pancreatic neoplasm primitive neuroectodermal tumor astrocytic tumor breast adenocarcinoma exocrine pancreatic carcinoma lung cancer Malignant neoplasm of breast metastatic melanoma ovarian cancer Pick disease squamous cell lung carcinoma atypical teratoid rhabdoid tumor breast carcinoma glioblastoma malignant ependymoma pancreatic neoplasm primitive neuroectodermal tumor astrocytic tumor breast adenocarcinoma exocrine pancreatic carcinoma lung cancer Malignant neoplasm of breast metastatic melanoma ovarian cancer Pick disease squamous cell lung carcinoma atypical teratoid rhabdoid tumor breast carcinoma glioblastoma malignant ependymoma ovarian serous adenocarcinoma pilocytic astrocytoma subependymal giant cell astrocytoma benign neoplasm of pancreas colorectal adenocarcinoma large cell medulloblastoma malignant glioma medulloblastoma oligodendroglioma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B [auth E]	TPO	Parent Component: THR RESID: AA0038 PSI-MOD : O-phospho-L-threonine MOD:00047

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.