Anemonia sulcata red fluorescent protein asRFP
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth M] | GFP | e3cfaM1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| E [auth R] | GFP | e3cfaR1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| G [auth S] | GFP | e3cfaS1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| D [auth B] | GFP | e3cfaB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| F [auth G] | GFP | e3cfaG1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
| H | GFP | e3cfaH1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth L] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (4.3.0) |
| C [auth M] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (4.3.0) |
| E [auth R] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (4.3.0) |
| G [auth S] | 3.30.1300.40 | Alpha Beta | 2-Layer Sandwich | Pantoate--beta-alanine Ligase | Chain: A,domain 2 | CATH (4.3.0) |
| B [auth A] | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| D [auth B] | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| F [auth G] | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| H | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth A], D [auth B], F [auth G], H | PF01353 | Green fluorescent protein (GFP) | Green fluorescent protein | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth L], C [auth M], E [auth R], G [auth S] | GFP-like fluorescent protein | - | - | |
| B [auth A], D [auth B], F [auth G], H | GFP-like fluorescent protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth L], C [auth M], E [auth R], G [auth S] | IPR011584 | Green fluorescent protein-related | Family |
| A [auth L], C [auth M], E [auth R], G [auth S] | IPR009017 | Green fluorescent protein | Homologous Superfamily |
| B [auth A], D [auth B], F [auth G], H | IPR011584 | Green fluorescent protein-related | Family |
| B [auth A], D [auth B], F [auth G], H | IPR009017 | Green fluorescent protein | Homologous Superfamily |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| B [auth A], D [auth B], F [auth G], H | CME | Parent Component: CYS |
| B [auth A], D [auth B], F [auth G], H | NRQ | Parent Component: MET, TYR, GLY : AA0379 : 2-imino-methionine 5-imidazolinone glycine MOD:00384 |
