Crystal Structure of PDZRhoGEF rgRGS Domain in a Complex with Galpha-13 Bound to GDP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3cx6b_ | All alpha proteins | Regulator of G-protein signaling, RGS | Regulator of G-protein signaling, RGS | Regulator of G-protein signaling, RGS | automated matches | Rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Galpha insert domain-like | 8056783 | 3000669 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8056782 | 3002022 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8056782 | 3002022 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Regulator of G-protein signaling, RGS | 8062616 | 4001125 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Regulator of G-protein signaling, RGS | 8062617 | 3000835 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | G-alpha | e3cx6A1 | A: alpha arrays | X: Transducin (alpha subunit), insertion domain (From Topology) | H: Transducin (alpha subunit), insertion domain (From Topology) | T: Transducin (alpha subunit), insertion domain | F: G-alpha | ECOD (1.6) |
A | MnmE_helical_2nd | e3cx6A2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MnmE_helical_2nd | ECOD (1.6) |
B | RGS-like | e3cx6B1 | A: alpha bundles | X: Regulator of G-protein signaling, RGS (From Topology) | H: Regulator of G-protein signaling, RGS (From Topology) | T: Regulator of G-protein signaling, RGS | F: RGS-like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.10.400.10 | Mainly Alpha | Orthogonal Bundle | GI Alpha 1, domain 2-like | GI Alpha 1, domain 2-like | CATH (4.3.0) |
B | 1.10.167.10 | Mainly Alpha | Orthogonal Bundle | Regulator of G-protein Signalling 4 | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09128 | Regulator of G protein signalling-like domain (RGS-like) | Regulator of G protein signalling-like domain | Members of this family adopt a structure consisting of twelve helices that fold into a compact domain that contains the overall structural scaffold observed in other RGS proteins and three additional helical elements that pack closely to it. Helices ... | Domain |