3HO4 | pdb_00003ho4

Crystal structure of Hedgehog-interacting protein (HHIP)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	EGF/Laminin-like	8090933	3000412	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GSDH-like	8090930	3001635	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	EGF/Laminin-like	8090934	3000412	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GSDH-like	8090930	3001635	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	EGF/Laminin-like	8090933	3000412	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	EGF/Laminin-like	8090934	3000412	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	GSDH	e3ho4B4	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: GSDH	ECOD (1.6)
B	hEGF_3	e3ho4B5	A: few secondary structure elements	X: EGF-like	H: EGF-related	T: EGF/Laminin	F: hEGF_3	ECOD (1.6)
B	EGF_2_like_1	e3ho4B6	A: few secondary structure elements	X: EGF-like	H: EGF-related	T: EGF/Laminin	F: EGF_2_like_1	ECOD (1.6)
A	GSDH	e3ho4A4	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: GSDH	ECOD (1.6)
A	hEGF_3	e3ho4A5	A: few secondary structure elements	X: EGF-like	H: EGF-related	T: EGF/Laminin	F: hEGF_3	ECOD (1.6)
A	EGF_2_like_1	e3ho4A6	A: few secondary structure elements	X: EGF-like	H: EGF-related	T: EGF/Laminin	F: EGF_2_like_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.10.25.10	Mainly Beta	Ribbon	Laminin	Laminin	CATH (4.3.0)
A	2.10.25.10	Mainly Beta	Ribbon	Laminin	Laminin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07995	Glucose / Sorbosone dehydrogenase (GSDH)	Glucose / Sorbosone dehydrogenase	-	Repeat
A, B	PF07974	EGF-like domain (EGF_2)	EGF-like domain	This family contains EGF domains found in a variety of extracellular proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Hedgehog-interacting protein	hedgehog family protein binding protein binding binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	cellular response to stimulus regulation of signaling regulation of biological process regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of response to stimulus biological regulation negative regulation of biological process regulation of signal transduction negative regulation of signal transduction negative regulation of cell communication cell communication regulation of response to stimulus cellular response to stimulus regulation of signaling regulation of biological process regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of response to stimulus biological regulation negative regulation of biological process regulation of signal transduction negative regulation of signal transduction negative regulation of cell communication cell communication regulation of response to stimulus negative regulation of cellular process regulation of cell communication cellular process signal transduction developmental process neuroblast proliferation multicellular organismal process cell population proliferation cellular developmental process nervous system development generation of neurons neurogenesis multicellular organism development cell differentiation anatomical structure development neural precursor cell proliferation system development response to fibroblast growth factor cellular response to growth factor stimulus cell surface receptor protein tyrosine kinase signaling pathway cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway cell surface receptor signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus fibroblast growth factor receptor signaling pathway response to growth factor cellular response to fibroblast growth factor stimulus regulation of fibroblast growth factor receptor signaling pathway anatomical structure morphogenesis skeletal system development animal organ development skeletal system morphogenesis animal organ morphogenesis dorsal/ventral pattern formation pattern specification process regionalization branching morphogenesis of an epithelial tube respiratory tube development tube morphogenesis lung morphogenesis lung development respiratory system development epithelial tube morphogenesis epithelium development tube development morphogenesis of an epithelium tissue development tissue morphogenesis morphogenesis of a branching structure epithelial tube branching involved in lung morphogenesis morphogenesis of a branching epithelium negative regulation of smoothened signaling pathway regulation of smoothened signaling pathway smoothened signaling pathway	cellular anatomical structure extracellular region cell surface cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm membrane-bounded organelle cilium ciliary membrane plasma membrane bounded cell projection cell projection bounding membrane of organelle cellular anatomical structure extracellular region cell surface cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm membrane-bounded organelle cilium ciliary membrane plasma membrane bounded cell projection cell projection bounding membrane of organelle organelle plasma membrane region organelle membrane cell projection membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011042	Six-bladed beta-propeller, TolB-like	Homologous Superfamily
A, B	IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase, beta-propeller domain superfamily	Homologous Superfamily
A, B	IPR018143	Folate receptor-like	Domain
A, B	IPR013111	Epidermal growth factor-like domain, extracellular	Domain
A, B	IPR012938	Glucose/Sorbosone dehydrogenase	Domain
A, B	IPR000742	EGF-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q96QV1	colorectal cancer gastrointestinal stromal tumor ovarian cancer Pick disease subependymal giant cell astrocytoma adrenal cortex carcinoma chronic obstructive pulmonary disease cystic fibrosis glioblastoma Liver carcinoma malignant ependymoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma pilocytic astrocytoma astrocytic tumor colorectal cancer gastrointestinal stromal tumor ovarian cancer Pick disease subependymal giant cell astrocytoma adrenal cortex carcinoma chronic obstructive pulmonary disease cystic fibrosis glioblastoma Liver carcinoma malignant ependymoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma pilocytic astrocytoma astrocytic tumor colorectal adenoma endometriosis hepatocellular carcinoma lung adenocarcinoma medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma progressive supranuclear palsy atypical teratoid rhabdoid tumor interstitial cystitis lung carcinoma non-alcoholic fatty liver disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.