3MDU | pdb_00003mdu

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutamate


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAmidohydro_1_C_2,PRK09229e3mduA2 A: beta sandwichesX: Composite domain of metallo-dependent hydrolases (From Topology)H: Composite domain of metallo-dependent hydrolases (From Topology)T: Composite domain of metallo-dependent hydrolasesF: Amidohydro_1_C_2,PRK09229ECOD (1.6)
AAmidohydro_1_Ne3mduA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Amidohydro_1_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.30.40.10 Mainly Beta Roll Urease, subunit C domain 1CATH (4.3.0)
A3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01979Amidohydrolase family (Amidohydro_1)Amidohydrolase familyThis family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ...This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5].
Domain
PF22429Formimidoylglutamate deiminase HutF, N-terminal domain (HutF_N)Formimidoylglutamate deiminase HutF, N-terminal domainThis small domain is found at the N-terminal end of Formimidoylglutamate deiminase from Pseudomonas aeruginosa (also known as N-formimino-L-Glutamate Iminohydrolase, HutF) and similar proteins predominantly found in proteobacteria. HutF catalyzes he ...This small domain is found at the N-terminal end of Formimidoylglutamate deiminase from Pseudomonas aeruginosa (also known as N-formimino-L-Glutamate Iminohydrolase, HutF) and similar proteins predominantly found in proteobacteria. HutF catalyzes he deamination of N-formimino-l-glutamate to N-formyl-l-glutamate and ammonia in the histidine degradation pathway [1]. The domain represented by this entry folds into an open beta-barrel which is completed by two strands located at the C terminus of the protein.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
N-formimino-L-Glutamate Iminohydrolase