3ZC0 | pdb_00003zc0

Structure of AfC3PO - duplex RNA complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Translin	e3zc0L1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
K	Translin	e3zc0K1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
J	Translin	e3zc0J1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
I	Translin	e3zc0I1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
H	Translin	e3zc0H1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
G	Translin	e3zc0G1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
F	Translin	e3zc0F1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
E	Translin	e3zc0E1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
D	Translin	e3zc0D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
C	Translin	e3zc0C1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
B	Translin	e3zc0B1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)
A	Translin	e3zc0A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Translin (From Topology)	T: Translin	F: Translin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
K	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
J	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
I	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
H	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
G	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
F	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
E	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
D	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
C	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	1.20.58.2140	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF01997	Translin family (Translin)	Translin family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
M, N, O	5'-R(UPUPCPGPAPCPGPCPGPUPCPGPAPAPUPU)-3'	-	-	-
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	AFTRAX	sequence-specific DNA binding DNA binding binding nucleic acid binding cation binding ion binding metal ion binding small molecule binding identical protein binding protein binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR002848	Translin family	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036081	Translin superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.