4L6U | pdb_00004l6u

Crystal structure of AF1868: Cmr1 subunit of the Cmr RNA silencing complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyRAMP-like 8044859 4004180 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyCRISPR-associated proteins 8052159 3001554 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyCRISPR-associated proteins 8052160 3001554 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyCRISPR-associated proteins 8052159 3001554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRAMPs_1e4l6uB2 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: RAMPs_1ECOD (1.6)
BCmr1e4l6uB3 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: Cmr1ECOD (1.6)
ARAMPs_1e4l6uA1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: RAMPs_1ECOD (1.6)
ACmr1e4l6uA2 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: Cmr1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF22407Cmr1, C-terminal domain (Cmr1_C)Cmr1, C-terminal domainThis entry represents the C-terminal RRM domain of CRISPR system Cmr subunit Cmr1 from Archaeoglobus fulgidus [1]. Domain
A, B
PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Putative uncharacterized protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR055061Cmr1, C-terminal domainDomain
A, B
IPR007522CRISPR-associated protein TM1795Family
A, B
IPR005537CRISPR type III-associated proteinDomain