5HAY | pdb_00005hay

Crystal structure of Chaetomium thermophilum Nup170 CTD Y905M L1007M L1183M V1292M mutant

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Nucleoporin_C_C	e5hayA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology)	T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains	F: Nucleoporin_C_C	ECOD (1.6)
B	Nucleoporin_C_C	e5hayB1	A: alpha superhelices	X: Repetitive alpha hairpins	H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology)	T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains	F: Nucleoporin_C_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.25.40.440	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Nucleoporin, helical domain, central subdomain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nucleoporin NUP170	structural molecule activity structural constituent of nuclear pore	RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular component organization organelle organization chromosome organization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery protein localization cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope protein localization to organelle cellular macromolecule localization protein localization to nuclear inner membrane establishment of protein localization nucleocytoplasmic transport nuclear transport intracellular transport import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell protein import into nucleus intracellular protein transport RNA export from nucleus nuclear export	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane nuclear pore inner ring membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane nuclear pore inner ring protein-containing complex nuclear protein-containing complex nuclear pore

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2	Homologous Superfamily
A, B	IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1	Homologous Superfamily
A, B	IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3	Homologous Superfamily
A, B	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
A, B	IPR004870	Nucleoporin, Nup155-like	Family
A, B	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.