E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| JB [auth KB] | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
| GD [auth HD] | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
| CB | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
| FD [auth GD] | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
| BB | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
| WA | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
| AD [auth BD] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
| ZC [auth AD] | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
| VA | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
| YC [auth ZC] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2B (2022-06-29) |
| UA | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2B (2022-06-29) |
| XC [auth YC] | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
| TA | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
| WC [auth XC] | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
| SA | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
| VC [auth WC] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
| RA | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
| UC [auth VC] | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
| QA | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
| TC [auth UC] | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
| PA | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
| SC [auth TC] | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
| OA | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
| QC [auth RC] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
| MA | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
| OC [auth PC] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
| KA | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
| NC [auth OC] | SCOP2B Superfamily | Peptidyl-tRNA hydrolase domain-like | 8054407 | 3001421 | SCOP2B (2022-06-29) |
| NC [auth OC] | SCOP2B Superfamily | RNA-binding domain, RBD | 8054405 | 3000110 | SCOP2B (2022-06-29) |
| JA | SCOP2B Superfamily | Peptidyl-tRNA hydrolase domain-like | 8054407 | 3001421 | SCOP2B (2022-06-29) |
| JA | SCOP2B Superfamily | RNA-binding domain, RBD | 8054405 | 3000110 | SCOP2B (2022-06-29) |
| KC [auth LC] | SCOP2B Superfamily | Ribosomal protein L36 | 8093658 | 3001346 | SCOP2B (2022-06-29) |
| GA | SCOP2B Superfamily | Ribosomal protein L36 | 8093658 | 3001346 | SCOP2B (2022-06-29) |
| JC [auth KC] | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
| FA | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
| HC [auth IC] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
| DA | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
| GC [auth HC] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
| CA | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
| EC [auth FC] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
| AA | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2B (2022-06-29) |
| DC [auth EC] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | Ribosomal L27 protein-like | 8041210 | 3000539 | SCOP2B (2022-06-29) |
| BC [auth CC] | SCOP2B Superfamily | Ribosomal L27 protein-like | 8041210 | 3000539 | SCOP2B (2022-06-29) |
| YB [auth ZB] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
| XB [auth YB] | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
| WB [auth XB] | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
| VB [auth WB] | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
| TB [auth UB] | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
| QB [auth RB] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
| PB [auth QB] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
| OB [auth PB] | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| MB [auth NB] | Ribosomal_L6 | e5j4dNB2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| MB [auth NB] | Ribosomal_L6_1 | e5j4dNB1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| I | Ribosomal_L6 | e5j4dI2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| I | Ribosomal_L6_1 | e5j4dI1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| LB [auth MB] | Ribosomal_L5_C | e5j4dMB1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| H | Ribosomal_L5_C | e5j4dH1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| KB [auth LB] | Ribosomal_L4 | e5j4dLB1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| G | Ribosomal_L4 | e5j4dG1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| JB [auth KB] | Ribosomal_L3 | e5j4dKB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| F | Ribosomal_L3 | e5j4dF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| GD [auth HD] | Ribosomal_S20p | e5j4dHD1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| CB | Ribosomal_S20p | e5j4dCB1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| FD [auth GD] | Ribosomal_S19 | e5j4dGD1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| BB | Ribosomal_S19 | e5j4dBB1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| ED [auth FD] | Ribosomal_S18 | e5j4dFD1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| AB | Ribosomal_S18 | e5j4dAB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| ZA | Ribosomal_S17_1 | e5j4dZA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| DD [auth ED] | Ribosomal_S17_1 | e5j4dED1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| YA | Ribosomal_S16_1 | e5j4dYA1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| CD [auth DD] | Ribosomal_S16_1 | e5j4dDD1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| IB [auth JB] | Ribosomal_L2_1 | e5j4dJB1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| IB [auth JB] | Ribosomal_L2_C | e5j4dJB2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| E | Ribosomal_L2_1 | e5j4dE2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| E | Ribosomal_L2_C | e5j4dE1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| XA | Ribosomal_S15_1 | e5j4dXA1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
| BD [auth CD] | Ribosomal_S15_1 | e5j4dCD1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
| WA | Ribosomal_S14 | e5j4dWA1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| AD [auth BD] | Ribosomal_S14 | e5j4dBD1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| ZC [auth AD] | Ribosomal_S13_1 | e5j4dAD1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
| VA | Ribosomal_S13_1 | e5j4dVA1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
| YC [auth ZC] | Ribosom_S12_S23 | e5j4dZC1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| UA | Ribosom_S12_S23 | e5j4dUA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| XC [auth YC] | Ribosomal_S11 | e5j4dYC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| TA | Ribosomal_S11 | e5j4dTA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| WC [auth XC] | Ribosomal_S10 | e5j4dXC1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| SA | Ribosomal_S10 | e5j4dSA1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| VC [auth WC] | Ribosomal_S9 | e5j4dWC1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| RA | Ribosomal_S9 | e5j4dRA1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| UC [auth VC] | Ribosomal_S8_N | e5j4dVC1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| UC [auth VC] | Ribosomal_S8_C | e5j4dVC2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| QA | Ribosomal_S8_N | e5j4dQA2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| QA | Ribosomal_S8_C | e5j4dQA1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| TC [auth UC] | Ribosomal_S7_1 | e5j4dUC1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| PA | Ribosomal_S7_1 | e5j4dPA1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| SC [auth TC] | Ribosomal_S6 | e5j4dTC1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| OA | Ribosomal_S6 | e5j4dOA1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| RC [auth SC] | Ribosomal_S5_C | e5j4dSC2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| RC [auth SC] | Ribosomal_S5 | e5j4dSC1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| NA | Ribosomal_S5_C | e5j4dNA2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| NA | Ribosomal_S5 | e5j4dNA1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| QC [auth RC] | S4 | e5j4dRC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| MA | S4 | e5j4dMA1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| PC [auth QC] | Ribosomal_S3_C | e5j4dQC2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| PC [auth QC] | KH_2_1 | e5j4dQC1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| LA | Ribosomal_S3_C | e5j4dLA1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| LA | KH_2_1 | e5j4dLA2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| OC [auth PC] | Ribosomal_S2 | e5j4dPC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2 | ECOD (1.6) |
| KA | Ribosomal_S2 | e5j4dKA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2 | ECOD (1.6) |
| NC [auth OC] | PCRF_C | e5j4dOC1 | A: a+b two layers | X: Alpha-beta plaits | H: Ferredoxin-like domain in release factor (From Topology) | T: Ferredoxin-like domain in release factor | F: PCRF_C | ECOD (1.6) |
| NC [auth OC] | RF-1_N | e5j4dOC2 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_N | ECOD (1.6) |
| NC [auth OC] | RF-1_C | e5j4dOC3 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_C | ECOD (1.6) |
| JA | PCRF_C | e5j4dJA1 | A: a+b two layers | X: Alpha-beta plaits | H: Ferredoxin-like domain in release factor (From Topology) | T: Ferredoxin-like domain in release factor | F: PCRF_C | ECOD (1.6) |
| JA | RF-1_N | e5j4dJA2 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_N | ECOD (1.6) |
| JA | RF-1_C | e5j4dJA3 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_C | ECOD (1.6) |
| KC [auth LC] | Ribosomal_L36 | e5j4dLC1 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: Ribosomal_L36 | ECOD (1.6) |
| GA | Ribosomal_L36 | e5j4dGA1 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: Ribosomal_L36 | ECOD (1.6) |
| JC [auth KC] | Ribosomal_L35p | e5j4dKC1 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| FA | Ribosomal_L35p | e5j4dFA1 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| IC [auth JC] | Ribosomal_L34 | e5j4dJC1 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| EA | Ribosomal_L34 | e5j4dEA1 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| HC [auth IC] | Ribosomal_L33 | e5j4dIC1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| DA | Ribosomal_L33 | e5j4dDA1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| GC [auth HC] | Ribosomal_L32p | e5j4dHC1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| CA | Ribosomal_L32p | e5j4dCA1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| FC [auth GC] | Ribosomal_L31 | e5j4dGC1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| BA | Ribosomal_L31 | e5j4dBA1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| EC [auth FC] | Ribosomal_L30 | e5j4dFC1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| AA | Ribosomal_L30 | e5j4dAA1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| Z | Ribosomal_L29 | e5j4dZ1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| DC [auth EC] | Ribosomal_L29 | e5j4dEC1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| Y | Ribosomal_L28 | e5j4dY1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| CC [auth DC] | Ribosomal_L28 | e5j4dDC1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| X | Ribosomal_L27 | e5j4dX1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| BC [auth CC] | Ribosomal_L27 | e5j4dCC1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| W | Ribosomal_L25p | e5j4dW1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| W | Ribosomal_TL5_C | e5j4dW2 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: Ribosomal_TL5_C | ECOD (1.6) |
| AC [auth BC] | Ribosomal_L25p | e5j4dBC1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| AC [auth BC] | Ribosomal_TL5_C | e5j4dBC2 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: Ribosomal_TL5_C | ECOD (1.6) |
| ZB [auth AC] | ribosomal_L24 | e5j4dAC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24 | ECOD (1.6) |
| V | ribosomal_L24 | e5j4dV1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24 | ECOD (1.6) |
| YB [auth ZB] | Ribosomal_L23_2 | e5j4dZB1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| U | Ribosomal_L23_2 | e5j4dU1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| XB [auth YB] | Ribosomal_L22 | e5j4dYB1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| T | Ribosomal_L22 | e5j4dT1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| WB [auth XB] | Ribosomal_L21p | e5j4dXB1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| S | Ribosomal_L21p | e5j4dS1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| VB [auth WB] | Ribosomal_L20 | e5j4dWB1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| R | Ribosomal_L20 | e5j4dR1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| UB [auth VB] | Ribosomal_L19 | e5j4dVB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| Q | Ribosomal_L19 | e5j4dQ1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| TB [auth UB] | Ribosomal_L18p | e5j4dUB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| P | Ribosomal_L18p | e5j4dP1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| SB [auth TB] | Ribosomal_L17_1 | e5j4dTB1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| O | Ribosomal_L17_1 | e5j4dO1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| RB [auth SB] | Ribosomal_L16 | e5j4dSB1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| N | Ribosomal_L16 | e5j4dN1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| QB [auth RB] | Ribosomal_L27A | e5j4dRB1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| M | Ribosomal_L27A | e5j4dM1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| PB [auth QB] | Ribosomal_L14 | e5j4dQB1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| L | Ribosomal_L14 | e5j4dL1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| OB [auth PB] | Ribosomal_L13 | e5j4dPB1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| K | Ribosomal_L13 | e5j4dK1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| NB [auth OB] | Ribosomal_L9_N | e5j4dOB2 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: Ribosomal_L9_N | ECOD (1.6) |
| NB [auth OB] | Ribosomal_L9_C | e5j4dOB1 | A: a+b two layers | X: Ribosomal protein L9 C-domain (From Topology) | H: Ribosomal protein L9 C-domain (From Topology) | T: Ribosomal protein L9 C-domain | F: Ribosomal_L9_C | ECOD (1.6) |
| J | Ribosomal_L9_N | e5j4dJ1 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: Ribosomal_L9_N | ECOD (1.6) |
| J | Ribosomal_L9_C | e5j4dJ2 | A: a+b two layers | X: Ribosomal protein L9 C-domain (From Topology) | H: Ribosomal protein L9 C-domain (From Topology) | T: Ribosomal protein L9 C-domain | F: Ribosomal_L9_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I, MB [auth NB] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| H, LB [auth MB] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| H, LB [auth MB] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| G, KB [auth LB] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| F, JB [auth KB] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| BB, FD [auth GD] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| AB, ED [auth FD] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| DD [auth ED], ZA | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| CD [auth DD], YA | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| E, IB [auth JB] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| E, IB [auth JB] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| BD [auth CD], XA | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| AD [auth BD], WA | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| VA, ZC [auth AD] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| UA, YC [auth ZC] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| TA, XC [auth YC] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| SA, WC [auth XC] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| RA, VC [auth WC] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| QA, UC [auth VC] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| OA, SC [auth TC] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| NA, RC [auth SC] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| NA, RC [auth SC] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| MA, QC [auth RC] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| MA, QC [auth RC] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| LA, PC [auth QC] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| LA, PC [auth QC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| KA, OC [auth PC] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| JA, NC [auth OC] | PF00472 | RF-1 domain (RF-1) | RF-1 domain | This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ... | Domain |
| GA, KC [auth LC] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| FA, JC [auth KC] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| EA, IC [auth JC] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| DA, HC [auth IC] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| CA, GC [auth HC] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| BA, FC [auth GC] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| AA, EC [auth FC] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| DC [auth EC], Z | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| CC [auth DC], Y | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| BC [auth CC], X | PF01016 | Ribosomal L27 protein (Ribosomal_L27) | Ribosomal L27 protein | - | Family |
| AC [auth BC], W | PF14693 | Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C) | Ribosomal protein TL5, C-terminal domain | This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ... | Domain |
| AC [auth BC], W | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
| V, ZB [auth AC] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| V, ZB [auth AC] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| U, YB [auth ZB] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| T, XB [auth YB] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| S, WB [auth XB] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| R, VB [auth WB] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| Q, UB [auth VB] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| O, SB [auth TB] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| N, RB [auth SB] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| M, QB [auth RB] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| L, PB [auth QB] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| K, OB [auth PB] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| J, NB [auth OB] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| J, NB [auth OB] | PF03948 | Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C) | Ribosomal protein L9, C-terminal domain | Domain | |














