5WJT | pdb_00005wjt

Cryo-EM structure of B. subtilis flagellar filaments N226Y


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFlagellin_Ne5wjtB1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
CFlagellin_Ne5wjtC1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
JFlagellin_Ne5wjtJ1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
KA [auth k]Flagellin_Ne5wjtk1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
OFlagellin_Ne5wjtO1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
AFlagellin_Ne5wjtA1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
AA [auth a]Flagellin_Ne5wjta1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
BA [auth b]Flagellin_Ne5wjtb1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
CA [auth c]Flagellin_Ne5wjtc1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
DFlagellin_Ne5wjtD1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
DA [auth d]Flagellin_Ne5wjtd1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
EFlagellin_Ne5wjtE1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
EA [auth e]Flagellin_Ne5wjte1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
FFlagellin_Ne5wjtF1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
FA [auth f]Flagellin_Ne5wjtf1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
GFlagellin_Ne5wjtG1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
GA [auth g]Flagellin_Ne5wjtg1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
HFlagellin_Ne5wjtH1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
HA [auth h]Flagellin_Ne5wjth1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
IFlagellin_Ne5wjtI1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
IA [auth i]Flagellin_Ne5wjti1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
JA [auth j]Flagellin_Ne5wjtj1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
KFlagellin_Ne5wjtK1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
LFlagellin_Ne5wjtL1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
LA [auth l]Flagellin_Ne5wjtl1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
MFlagellin_Ne5wjtM1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
MA [auth m]Flagellin_Ne5wjtm1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
NFlagellin_Ne5wjtN1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
NA [auth n]Flagellin_Ne5wjtn1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
OA [auth o]Flagellin_Ne5wjto1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
PFlagellin_Ne5wjtP1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
QFlagellin_Ne5wjtQ1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
RFlagellin_Ne5wjtR1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
SFlagellin_Ne5wjtS1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
TFlagellin_Ne5wjtT1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
UFlagellin_Ne5wjtU1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
VFlagellin_Ne5wjtV1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
WFlagellin_Ne5wjtW1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
XFlagellin_Ne5wjtX1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
YFlagellin_Ne5wjtY1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)
ZFlagellin_Ne5wjtZ1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-helical domain in phase 1 flagellin (From Topology)T: alpha-helical domain in phase 1 flagellinF: Flagellin_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
C1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
J1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
KA [auth k]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
O1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
A1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
AA [auth a]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
BA [auth b]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
CA [auth c]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
D1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
DA [auth d]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
E1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
EA [auth e]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
F1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
FA [auth f]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
G1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
GA [auth g]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
H1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
HA [auth h]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
I1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
IA [auth i]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
JA [auth j]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
K1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
L1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
LA [auth l]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
M1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
MA [auth m]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
N1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
NA [auth n]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
OA [auth o]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
P1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
Q1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
R1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
S1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
T1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
U1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
V1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
W1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
X1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
Y1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
Z1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00700Bacterial flagellin C-terminal helical region (Flagellin_C)Bacterial flagellin C-terminal helical regionFlagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family