Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPUAe5wwrB2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PUAECOD (1.6)
BUNK_F_TYPEe5wwrB3 A: a+b two layersX: Alpha-beta plaitsH: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology)T: NOL1/NOP2/sun N-terminal ferredoxin-like domainF: UNK_F_TYPEECOD (1.6)
BMethyltr_RsmB-F_1e5wwrB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Methyltr_RsmB-F_1ECOD (1.6)
APUAe5wwrA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PUAECOD (1.6)
AUNK_F_TYPEe5wwrA2 A: a+b two layersX: Alpha-beta plaitsH: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology)T: NOL1/NOP2/sun N-terminal ferredoxin-like domainF: UNK_F_TYPEECOD (1.6)
AMethyltr_RsmB-F_1e5wwrA3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Methyltr_RsmB-F_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF0118916S rRNA methyltransferase RsmB/F (Methyltr_RsmB-F)16S rRNA methyltransferase RsmB/FThis is the catalytic core of this SAM-dependent 16S ribosomal methyltransferase RsmB/F enzyme [1,2]. There is a catalytic cysteine residue at 180 in UniProtKB:Q5SII2, with another highly conserved cysteine at residue 230. It methylates the C(5) posi ...This is the catalytic core of this SAM-dependent 16S ribosomal methyltransferase RsmB/F enzyme [1,2]. There is a catalytic cysteine residue at 180 in UniProtKB:Q5SII2, with another highly conserved cysteine at residue 230. It methylates the C(5) position of cytosine 2870 (m5C2870) in 25S rRNA [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Putative methyltransferase NSUN6
C, D
tRNA---