5XMC | pdb_00005xmc

Crystal structure of the auto-inhibited Nedd4 family E3 ligase Itch


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyWW domain 8091384 4002695 SCOP2 (2022-06-29)
ASCOP2 FamilyWW domain 8091386 4002695 SCOP2 (2022-06-29)
ASCOP2 FamilyHect, E3 ligase catalytic domain 8091388 4002196 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWW domain 8091385 3001621 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWW domain 8091387 3001621 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHect, E3 ligase catalytic domain 8091389 3000934 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AWWe5xmcA3 A: beta meandersX: WW domain-likeH: WW domain (From Topology)T: WW domainF: WWECOD (1.6)
AHECTe5xmcA1 A: a+b complex topologyX: Hect, E3 ligase catalytic domain (From Topology)H: Hect, E3 ligase catalytic domain (From Topology)T: Hect, E3 ligase catalytic domainF: HECTECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00397WW domain (WW)WW domainThe WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro. Domain
PF00632HECT-domain (ubiquitin-transferase) (HECT)HECT-domain (ubiquitin-transferase)The name HECT comes from Homologous to the E6-AP Carboxyl Terminus. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E3 ubiquitin-protein ligase Itchy