Crystal structure of H. pylori HtrA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Trypsin_2 | e5y2dA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Trypsin_2 | ECOD (1.6) |
| A | PDZ_2 | e5y2dA2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13180 | PDZ domain (PDZ_2) | PDZ domain | Domain | ||
| PF13365 | Trypsin-like peptidase domain (Trypsin_2) | Trypsin-like peptidase domain | This family includes trypsin-like peptidase domains. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK | - | - | - | |
| UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK | - | - | - | |
| UNK-UNK-K-UNK-UNK-UNK-UNK-UNK-UNK-UNK | - | - | - | |
| UNK-UNK-UNK-UNK-UNK | - | - | - | |
| UNK-UNK-UNK | - | - | - | |
| Periplasmic serine endoprotease DegP-like | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051201 | Chloroplastic and Bacterial Serine Proteases | Family | |
| IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
| IPR011782 | Peptidase S1C, Do | Family | |
| IPR001478 | PDZ domain | Domain | |
| IPR001940 | Peptidase S1C | Family | |
| IPR036034 | PDZ superfamily | Homologous Superfamily |














