6CL5 | pdb_00006cl5

Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e6cl5A3	A: beta sandwiches	X: Agglutinin HPA-like	H: Agglutinin HPA-like (From Topology)	T: Agglutinin HPA-like	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6cl5A1	A: a+b two layers	X: Cystatin-like	H: Phi ETA orf 56-like protein C-terminal domains (From Topology)	T: Phi ETA orf 56-like protein C-terminal domains	F: UNK_F_TYPE	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
E	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
D	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
C	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
B	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)
A	2.60.40.3940	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF21882	Putative tail fiber protein gp53-like, C-terminal (Gp53-like_C)	Putative tail fiber protein gp53-like, C-terminal	This entry represents a domain found at the C-terminal of putative tail fiber protein from Acinetobacter phage AP22 (Swiss:I2GUG0, gp53) and similar uncharacterised sequences from tailed bacteriophages and prophages mainly found in proteobacteria. It ...	This entry represents a domain found at the C-terminal of putative tail fiber protein from Acinetobacter phage AP22 (Swiss:I2GUG0, gp53) and similar uncharacterised sequences from tailed bacteriophages and prophages mainly found in proteobacteria. It shows structural similarities to other phage/virus host cell-binding fibres. These domains form a trimeric arrangement.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Tail fiber protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR051934	Bacteriophage Tail Fiber Structural Protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR054075	Putative tail fiber protein gp53-like, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR022225	Phage tail fibre protein, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.