6GVW | pdb_00006gvw

Crystal structure of the BRCA1-A complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BMPN_BRCC36e6gvwB2 A: alpha bundlesX: BRCC36 C-terminal helical domain (From Topology)H: BRCC36 C-terminal helical domain (From Topology)T: BRCC36 C-terminal helical domainF: MPN_BRCC36ECOD (1.6)
BJAB_1e6gvwB1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: JAB_1ECOD (1.6)
GMPN_BRCC36e6gvwG2 A: alpha bundlesX: BRCC36 C-terminal helical domain (From Topology)H: BRCC36 C-terminal helical domain (From Topology)T: BRCC36 C-terminal helical domainF: MPN_BRCC36ECOD (1.6)
GJAB_1e6gvwG1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: JAB_1ECOD (1.6)
FCOMMD1_Ne6gvwF2 A: alpha bundlesX: BRCC36 C-terminal helical domain (From Topology)H: BRCC36 C-terminal helical domain (From Topology)T: BRCC36 C-terminal helical domainF: COMMD1_NECOD (1.6)
FMPN_2A_DUB_likee6gvwF1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: MPN_2A_DUB_likeECOD (1.6)
CUNK_F_TYPEe6gvwC2 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UNK_F_TYPEECOD (1.6)
HUNK_F_TYPEe6gvwH2 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UNK_F_TYPEECOD (1.6)
DVWAe6gvwD1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: VWAECOD (1.6)
IVWAe6gvwI1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: VWAECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)
G3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, G
PF18110BRCC36 C-terminal helical domain (BRCC36_C)BRCC36 C-terminal helical domainThis is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling ...This is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling or DNA-damage recognition. The domain consists of 2 non canonical helices. The domain interacts hydrophobically with helices alpha 4 and alpha 5 of KIAA0157 in the form of a coiled coil helical bundle. This interaction helps establish the association of BRCC36 with KIAA0157, a pseudo-DUB MPN- protein that is essential for the activity of BRCC36 [1].
Domain
A, F
PF21125BRCA1-A complex subunit Abraxas 1 MPN domain (MPN_2A_DUB_like)BRCA1-A complex subunit Abraxas 1 MPN domainThis entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substra ...This entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substrates.
Domain
C, H
PF06113Brain and reproductive organ-expressed protein (BRE) (BRE)Brain and reproductive organ-expressed protein (BRE)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, G
Lys-63-specific deubiquitinase BRCC36
E, J
BRCA1-A complex subunit RAP80
A, F
BRCA1-A complex subunit Abraxas 1
C, H
BRISC and BRCA1-A complex member 2
D, I
BRISC and BRCA1-A complex member 1