6HCM

Structure of the rabbit collided di-ribosome (stalled monosome)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L [auth L1]	SCOP2B Superfamily	Winged helix DNA-binding domain	8055720	3000034	SCOP2B (2022-06-29)
M [auth M1]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)
M [auth M1]	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
N [auth N1]	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
O [auth O1]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
O [auth O1]	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
R [auth R1]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
T [auth T1]	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
V [auth V1]	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
X [auth X1]	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
AA [auth a1]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)
C [auth C1]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053216	3002166	SCOP2B (2022-06-29)
DA [auth d1]	SCOP2B Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2B (2022-06-29)
EA [auth e1]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
FA [auth f1]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
HA [auth h1]	SCOP2B Superfamily	WD40 repeat-like	8097816	3001694	SCOP2B (2022-06-29)
JA [auth k1]	SCOP2B Superfamily	ABC transporter-like P-loop ATPases	8089861	3002020	SCOP2B (2022-06-29)
JA [auth k1]	SCOP2B Superfamily	ABC transporter-like P-loop ATPases	8089860	3002020	SCOP2B (2022-06-29)
JA [auth k1]	SCOP2B Superfamily	4Fe-4S ferredoxins	8089857	3000020	SCOP2B (2022-06-29)
OA [auth B3]	SCOP2B Superfamily	Translational proteins	8078357	3000811	SCOP2B (2022-06-29)
VA [auth N3]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8082477	3000210	SCOP2B (2022-06-29)
XA [auth P3]	SCOP2B Superfamily	Ribosomal protein L22	8097828	3001078	SCOP2B (2022-06-29)
DB [auth V3]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8072048	3000433	SCOP2B (2022-06-29)
FB [auth X3]	SCOP2B Superfamily	Ribosomal proteins S24e L23 and L15e	8095966	3000210	SCOP2B (2022-06-29)
GB [auth Y3]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8076754	3000334	SCOP2B (2022-06-29)
KB [auth c3]	SCOP2B Superfamily	L30e-like	8094953	3001739	SCOP2B (2022-06-29)
MB [auth e3]	SCOP2B Superfamily	Ribosomal protein L32e	8102088	3000982	SCOP2B (2022-06-29)
NB [auth f3]	SCOP2B Superfamily	Translational proteins	8093714	3000811	SCOP2B (2022-06-29)
QB [auth i3]	SCOP2B Superfamily	Ribosomal protein L36e	8053119	3002161	SCOP2B (2022-06-29)
G [auth G1]	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)
TB [auth l3]	SCOP2B Superfamily	Ribosomal protein L39e	8095597	3001756	SCOP2B (2022-06-29)
XB [auth p3]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8101435	3001320	SCOP2B (2022-06-29)
DC [auth J3]	SCOP2B Superfamily	RL5-like	8073894	3001709	SCOP2B (2022-06-29)
FC [auth D3]	SCOP2B Superfamily	Translational machinery components	8052886	3000571	SCOP2B (2022-06-29)
GC [auth I3]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8097320	3000884	SCOP2B (2022-06-29)
IC [auth u3]	SCOP2B Superfamily	Ribosomal protein L1p/L10e-like	8065344	3001911	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
K [auth K1]	S4	e6hcmK11	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
Z [auth Z1]	Ribosomal_S24e	e6hcmZ11	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
YA [auth Q3]	Ribosomal_L18	e6hcmQ31	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
AB [auth S3]	Ribosomal_L18A	e6hcmS31	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: Ribosomal_L18A	ECOD (1.6)
LB [auth d3]	Ribosomal_L31e	e6hcmd31	A: a+b two layers	X: Ribosomal protein L31e-like	H: Ribosomal protein L31e/gp120 outer domain (From Topology)	T: Ribosomal protein L31e/gp120 outer domain	F: Ribosomal_L31e	ECOD (1.6)
J [auth J1]	Ribosomal_S8e	e6hcmJ11	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
L [auth L1]	S10_plectin	e6hcmL11	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
M [auth M1]	Ribosomal_S17_1	e6hcmM11	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
N [auth N1]	Ribosomal_L7Ae	e6hcmN11	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
O [auth O1]	Ribosomal_S13_N	e6hcmO11	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
O [auth O1]	Ribosomal_S15_2	e6hcmO12	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
P [auth P1]	Ribosomal_S11	e6hcmP11	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
Q [auth Q1]	Ribosomal_S19	e6hcmQ11	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
R [auth R1]	Ribosomal_S9	e6hcmR11	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
S [auth S1]	Ribosomal_S17e	e6hcmS11	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
B [auth B1]	Ribosomal_S2_2	e6hcmB11	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
T [auth T1]	Ribosomal_S13	e6hcmT11	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
U [auth U1]	Ribosomal_S19e	e6hcmU11	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
V [auth V1]	Ribosomal_S10_1	e6hcmV11	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
W [auth W1]	Ribosomal_S21e	e6hcmW11	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
X [auth X1]	Ribosomal_S8_N_1	e6hcmX12	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
X [auth X1]	Ribosomal_S8_C_1	e6hcmX11	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
Y [auth Y1]	Ribosom_S12_S23	e6hcmY11	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
AA [auth a1]	Ribosomal_S25	e6hcma11	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
BA [auth b1]	Ribosomal_S26e	e6hcmb11	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
CA [auth c1]	Ribosomal_S27e	e6hcmc11	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
C [auth C1]	Ribosomal_S3Ae_N	e6hcmC11	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
C [auth C1]	Ribosomal_S3Ae_C	e6hcmC12	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
DA [auth d1]	Ribosomal_S28e	e6hcmd11	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
EA [auth e1]	Ribosomal_S14_2	e6hcme11	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
FA [auth f1]	Ribosomal_S30	e6hcmf11	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
GA [auth g1]	Ribosomal_S27	e6hcmg11	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
HA [auth h1]	DUF1899	e6hcmh11	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
IA [auth j1]	eRF1_3	e6hcmj11	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: eRF1_3	ECOD (1.6)
IA [auth j1]	eRF1_1_1	e6hcmj12	A: a+b three layers	X: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)	H: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)	T: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	F: eRF1_1_1	ECOD (1.6)
IA [auth j1]	eRF1_2	e6hcmj13	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: eRF1_2	ECOD (1.6)
JA [auth k1]	RLI	e6hcmk13	A: a+b two layers	X: 4Fe-4S ferredoxin (From Topology)	H: 4Fe-4S ferredoxin (From Topology)	T: 4Fe-4S ferredoxin	F: RLI	ECOD (1.6)
JA [auth k1]	ABC_tran	e6hcmk12	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ABC_tran	ECOD (1.6)
D [auth D1]	Ribosomal_S5_C_1	e6hcmD13	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
D [auth D1]	Ribosomal_S5_3	e6hcmD11	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
D [auth D1]	Ribosomal_S5_2	e6hcmD12	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
NA [auth A3]	Ribosomal_L2_1	e6hcmA32	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
NA [auth A3]	Ribosomal_L2_C_2	e6hcmA31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C_2	ECOD (1.6)
OA [auth B3]	Ribosomal_L3	e6hcmB31	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
PA [auth C3]	Ribosomal_L4	e6hcmC31	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
PA [auth C3]	Ribos_L4_asso_C	e6hcmC32	A: extended segments	X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	T: C-terminal helical region in 60S ribosomal protein L4 (L4p)	F: Ribos_L4_asso_C	ECOD (1.6)
QA [auth E3]	Ribosomal_L6e	e6hcmE31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L6e	ECOD (1.6)
RA [auth F3]	Ribosomal_L30_1	e6hcmF31	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30_1	ECOD (1.6)
SA [auth H3]	Ribosomal_L6_2	e6hcmH31	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_2	ECOD (1.6)
SA [auth H3]	Ribosomal_L6	e6hcmH32	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
TA [auth L3]	Ribosomal_L13e	e6hcmL31	A: extended segments	X: RPL13 (From Topology)	H: RPL13 (From Topology)	T: RPL13	F: Ribosomal_L13e	ECOD (1.6)
UA [auth M3]	Ribosomal_L14e	e6hcmM31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L14e	ECOD (1.6)
VA [auth N3]	Ribosomal_L15e	e6hcmN31	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L15e	ECOD (1.6)
WA [auth O3]	Ribosomal_L13	e6hcmO31	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
E [auth E1]	Ribosomal_S3_C	e6hcmE11	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
E [auth E1]	KH_2_3	e6hcmE12	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
XA [auth P3]	Ribosomal_L22	e6hcmP31	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
ZA [auth R3]	Ribosomal_L19e_N	e6hcmR32	A: alpha arrays	X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) N-terminal domain	F: Ribosomal_L19e_N	ECOD (1.6)
ZA [auth R3]	Ribosomal_L19e_C	e6hcmR31	A: alpha bundles	X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) C-terminal domain	F: Ribosomal_L19e_C	ECOD (1.6)
BB [auth T3]	Ribosomal_L21e	e6hcmT31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L21e	ECOD (1.6)
CB [auth U3]	Ribosomal_L22e	e6hcmU31	A: a+b two layers	X: Ribosomal protein L22e (From Topology)	H: Ribosomal protein L22e (From Topology)	T: Ribosomal protein L22e	F: Ribosomal_L22e	ECOD (1.6)
DB [auth V3]	Ribosomal_L14	e6hcmV31	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
EB [auth W3]	Ribosomal_L24e	e6hcmW31	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_L24e	ECOD (1.6)
FB [auth X3]	Ribosomal_L23_3	e6hcmX31	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_3	ECOD (1.6)
GB [auth Y3]	Ribosomal_L26	e6hcmY31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L26	ECOD (1.6)
F [auth F1]	Ribosomal_S4e	e6hcmF11	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
F [auth F1]	40S_S4_C	e6hcmF13	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
F [auth F1]	RS4NT	e6hcmF12	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
HB [auth Z3]	Ribosomal_L27e	e6hcmZ31	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L27e	ECOD (1.6)
IB [auth a3]	Ribosomal_L18	e6hcma31	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
JB [auth b3]	Ribosomal_L29e	e6hcmb31	A: extended segments	X: RPL29 (From Topology)	H: RPL29 (From Topology)	T: RPL29	F: Ribosomal_L29e	ECOD (1.6)
KB [auth c3]	Ribosomal_L7Ae	e6hcmc31	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
MB [auth e3]	Ribosomal_L32e	e6hcme31	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L32e (From Topology)	T: Ribosomal protein L32e	F: Ribosomal_L32e	ECOD (1.6)
NB [auth f3]	Ribosomal_L35Ae	e6hcmf31	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L35Ae	ECOD (1.6)
OB [auth g3]	Ribosomal_L34e	e6hcmg31	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: RPL34 (From Topology)	T: RPL34	F: Ribosomal_L34e	ECOD (1.6)
PB [auth h3]	Ribosomal_L29_2	e6hcmh31	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29_2	ECOD (1.6)
QB [auth i3]	Ribosomal_L36e	e6hcmi31	A: alpha arrays	X: 60S ribosomal protein rpL36 (L36e) (From Topology)	H: 60S ribosomal protein rpL36 (L36e) (From Topology)	T: 60S ribosomal protein rpL36 (L36e)	F: Ribosomal_L36e	ECOD (1.6)
G [auth G1]	Ribosomal_S7_1	e6hcmG11	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
RB [auth j3]	Ribosomal_L37e	e6hcmj31	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37e	ECOD (1.6)
SB [auth k3]	Ribosomal_L38e	e6hcmk31	A: a+b two layers	X: SRP9/14-like	H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)	T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related	F: Ribosomal_L38e	ECOD (1.6)
TB [auth l3]	Ribosomal_L39	e6hcml31	A: extended segments	X: Ribosomal protein L39e (From Topology)	H: Ribosomal protein L39e (From Topology)	T: Ribosomal protein L39e	F: Ribosomal_L39	ECOD (1.6)
UB [auth m3]	Ribosomal_L40e	e6hcmm31	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L40e	ECOD (1.6)
VB [auth n3]	Ribosomal_L41	e6hcmn31	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: Ribosomal_L41	ECOD (1.6)
WB [auth o3]	Ribosomal_L44	e6hcmo31	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L44	ECOD (1.6)
XB [auth p3]	Ribosomal_L37ae	e6hcmp31	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37ae	ECOD (1.6)
YB [auth r3]	Ribosomal_L28e	e6hcmr31	A: a+b two layers	X: RPL28 (From Topology)	H: RPL28 (From Topology)	T: RPL28	F: Ribosomal_L28e	ECOD (1.6)
ZB [auth s3]	Ribosomal_L10	e6hcms31	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein L10-like (From Topology)	T: Ribosomal protein L10-like	F: Ribosomal_L10	ECOD (1.6)
ZB [auth s3]	Ribosomal_P0_L10e	e6hcms32	A: a+b two layers	X: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)	T: Insertion domain in 60S ribosomal protein rpP0 (L10P)	F: Ribosomal_P0_L10e	ECOD (1.6)
AC [auth t3]	Ribosomal_L11	e6hcmt32	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
AC [auth t3]	Ribosomal_L11_N	e6hcmt31	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: Ribosomal_L11_N	ECOD (1.6)
H [auth H1]	Ribosomal_S6e	e6hcmH11	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
DC [auth J3]	Ribosomal_L5_C	e6hcmJ31	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
EC [auth G3]	Ribosomal_L7Ae_1	e6hcmG31	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae_1	ECOD (1.6)
FC [auth D3]	Ribosomal_L5e	e6hcmD31	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L5e	ECOD (1.6)
GC [auth I3]	Ribosomal_L16	e6hcmI31	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
IC [auth u3]	Ribosomal_L1_2nd_1	e6hcmu31	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: Ribosomal_L1_2nd_1	ECOD (1.6)
IC [auth u3]	Ribosomal_L1_1st_1	e6hcmu32	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: Ribosomal_L1_1st_1	ECOD (1.6)
I [auth I1]	Ribosomal_S7e_N	e6hcmI12	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
I [auth I1]	Ribosomal_S7e_C_1	e6hcmI11	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
K [auth K1]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
K [auth K1]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
LB [auth d3]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
L [auth L1]	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
M [auth M1]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
M [auth M1]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17	-	Domain
N [auth N1]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
O [auth O1]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
O [auth O1]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15	-	Domain
Q [auth Q1]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19	-	Domain
R [auth R1]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
S [auth S1]	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
T [auth T1]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
V [auth V1]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
X [auth X1]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8	-	Domain
AA [auth a1]	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
CA [auth c1]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
C [auth C1]	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
DA [auth d1]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
EA [auth e1]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
FA [auth f1]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
GA [auth g1]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
HA [auth h1]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
JA [auth k1]	PF04068	Possible Fer4-like domain in RNase L inhibitor, RLI (RLI)	Possible Fer4-like domain in RNase L inhibitor, RLI	-	Family
JA [auth k1]	PF00037	4Fe-4S binding domain (Fer4)	4Fe-4S binding domain	Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich.	Domain
JA [auth k1]	PF00005	ABC transporter (ABC_tran)	ABC transporter	ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...	ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.	Domain
NA [auth A3]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain	-	Domain
NA [auth A3]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain	-	Domain
OA [auth B3]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
QA [auth E3]	PF03868	Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)	Ribosomal protein L6, N-terminal domain	-	Domain
QA [auth E3]	PF01159	Ribosomal protein L6e (Ribosomal_L6e)	Ribosomal protein L6e	-	Family
RA [auth F3]	PF08079	Ribosomal L30 N-terminal domain (Ribosomal_L30_N)	Ribosomal L30 N-terminal domain	This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].	Domain
RA [auth F3]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
SA [auth H3]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6	-	Domain
UA [auth M3]	PF01929	Ribosomal protein L14 (Ribosomal_L14e)	Ribosomal protein L14	-	Family
VA [auth N3]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
E [auth E1]	PF07650	KH domain (KH_2)	KH domain	-	Domain
E [auth E1]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
XA [auth P3]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
BB [auth T3]	PF01157	Ribosomal protein L21e (Ribosomal_L21e)	Ribosomal protein L21e	-	Family
DB [auth V3]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e	-	Domain
FB [auth X3]	PF03939	Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)	Ribosomal protein L23, N-terminal domain	-	Family
FB [auth X3]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
GB [auth Y3]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
GB [auth Y3]	PF00467	KOW motif (KOW)	KOW motif	-	Family
KB [auth c3]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
MB [auth e3]	PF01655	Ribosomal protein L32 (Ribosomal_L32e)	Ribosomal protein L32	-	Family
NB [auth f3]	PF01247	Ribosomal protein L35Ae (Ribosomal_L35Ae)	Ribosomal protein L35Ae	-	Domain
PB [auth h3]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
QB [auth i3]	PF01158	Ribosomal protein L36e (Ribosomal_L36e)	Ribosomal protein L36e	-	Family
G [auth G1]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
RB [auth j3]	PF01907	Ribosomal protein L37e (Ribosomal_L37e)	Ribosomal protein L37e	-	Family
TB [auth l3]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
XB [auth p3]	PF01780	Ribosomal L37ae protein family (Ribosomal_L37ae)	Ribosomal L37ae protein family	-	Family
YB [auth r3]	PF01778	Ribosomal L28e protein family (Ribosomal_L28e)	Ribosomal L28e protein family	-	Family
AC [auth t3]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
AC [auth t3]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain	-	Domain
H [auth H1]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
DC [auth J3]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5	-	Domain
DC [auth J3]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
FC [auth D3]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
FC [auth D3]	PF14204	Ribosomal L18 C-terminal region (Ribosomal_L18_c)	Ribosomal L18 C-terminal region	This domain is the C-terminal end of ribosomal L18/L5 proteins.	Domain
GC [auth I3]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e	-	Domain
IC [auth u3]	PF00687	Ribosomal protein L1p/L10e family (Ribosomal_L1)	Ribosomal protein L1p/L10e family	This family includes prokaryotic L1 and eukaryotic L10.	Domain
I [auth I1]	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
K [auth K1]	Ribosomal protein S9 (Predicted)	-	-	-
Z [auth Z1]	eS24	-	-	-
YA [auth Q3]	eL18	-	-	-
AB [auth S3]	eL20	-	-	-
LB [auth d3]	eL31	-	-	-
CC [auth w3]	mRNA	-	-	-
HC [auth 1]	nascent chain	-	-	-
A [auth A1]	18S ribosomal RNA	-	-	-
J [auth J1]	eS8	-	-	-
L [auth L1]	eS10	-	-	-
M [auth M1]	Ribosomal protein S11	-	-	-
N [auth N1]	40S ribosomal protein S12	-	-	-
O [auth O1]	uS15	-	-	-
P [auth P1]	uS11	-	-	-
Q [auth Q1]	uS19	-	-	-
R [auth R1]	Ribosomal protein S16	-	-	-
S [auth S1]	eS17	-	-	-
B [auth B1]	uS2	-	-	-
T [auth T1]	uS13	-	-	-
U [auth U1]	eS19	-	-	-
V [auth V1]	uS10	-	-	-
W [auth W1]	eS21	-	-	-
X [auth X1]	Ribosomal protein S15a	-	-	-
Y [auth Y1]	uS12	-	-	-
AA [auth a1]	eS25	-	-	-
BA [auth b1]	eS26	-	-	-
CA [auth c1]	40S ribosomal protein S27	-	-	-
C [auth C1]	40S ribosomal protein S3a	-	-	-
DA [auth d1]	Ribosomal protein S28	-	-	-
EA [auth e1]	uS14	-	-	-
FA [auth f1]	40S ribosomal protein S30	-	-	-
GA [auth g1]	Ribosomal protein S27a	-	-	-
HA [auth h1]	RACK1	-	-	-
IA [auth j1]	eRF1(AAQ)	-	-	-
JA [auth k1]	ATP binding cassette subfamily E member 1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	-	-
KA [auth 52]	28S ribosomal RNA	-	-	-
LA [auth 72]	5S ribosomal RNA	-	-	-
MA [auth 82]	5.8S ribosomal RNA	-	-	-
D [auth D1]	uS5	-	-	-
NA [auth A3]	Ribosomal protein L8	-	-	-
OA [auth B3]	uL3	-	-	-
PA [auth C3]	uL4	-	-	-
QA [auth E3]	60S ribosomal protein L6	-	-	-
RA [auth F3]	uL30	RNA binding binding organic cyclic compound binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis cellular biosynthetic process RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process ribosome biogenesis organic substance metabolic process organic substance biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process cellular metabolic process primary metabolic process ribonucleoprotein complex biogenesis cellular biosynthetic process RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process ribosome biogenesis organic substance metabolic process organic substance biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process cellular metabolic process primary metabolic process gene expression ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) organic cyclic compound metabolic process biosynthetic process ncRNA metabolic process nucleic acid catabolic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA	protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytoplasm cytosol large ribosomal subunit protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytoplasm cytosol large ribosomal subunit non-membrane-bounded organelle
SA [auth H3]	uL6	-	-	-
TA [auth L3]	eL13	-	-	-
UA [auth M3]	Ribosomal protein L14	-	-	-
VA [auth N3]	Ribosomal protein L15	-	-	-
WA [auth O3]	uL13	-	-	-
E [auth E1]	uS3	-	-	-
XA [auth P3]	uL22	-	-	-
ZA [auth R3]	eL19	-	-	-
BB [auth T3]	eL21	-	-	-
CB [auth U3]	eL22	-	-	-
DB [auth V3]	Ribosomal protein L23	-	-	-
EB [auth W3]	eL24	-	-	-
FB [auth X3]	uL23	-	-	-
GB [auth Y3]	Ribosomal protein L26	-	-	-
F [auth F1]	eS4	-	-	-
HB [auth Z3]	eL27	-	-	-
IB [auth a3]	uL15	-	-	-
JB [auth b3]	eL29	-	-	-
KB [auth c3]	eL30	-	-	-
MB [auth e3]	eL32	-	-	-
NB [auth f3]	eL33	-	-	-
OB [auth g3]	eL34	-	-	-
PB [auth h3]	uL29	-	-	-
QB [auth i3]	60S ribosomal protein L36	-	-	-
G [auth G1]	Ribosomal protein S5	-	-	-
RB [auth j3]	Ribosomal protein L37	-	-	-
SB [auth k3]	eL38	-	-	-
TB [auth l3]	eL39	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
UB [auth m3]	eL40	-	-	-
VB [auth n3]	eL41	-	-	-
WB [auth o3]	eL42	-	-	-
XB [auth p3]	eL43	-	-	-
YB [auth r3]	eL28	-	-	-
ZB [auth s3]	uL10	-	-	-
AC [auth t3]	Ribosomal protein L12	-	-	-
H [auth H1]	40S ribosomal protein S6	-	-	-
BC [auth 23]	P-site tRNA	-	-	-
DC [auth J3]	Ribosomal protein L11	-	-	-
EC [auth G3]	eL8	-	-	-
FC [auth D3]	60S ribosomal protein L5	-	-	-
GC [auth I3]	60S ribosomal protein L10	-	-	-
IC [auth u3]	Ribosomal protein	-	-	-
I [auth I1]	40S ribosomal protein S7	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
L [auth L1]	IPR037447	Small ribosomal subunit protein eS10	Family
L [auth L1]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
L [auth L1]	IPR005326	Plectin/eS10, N-terminal	Domain
JA [auth k1]	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
JA [auth k1]	IPR007209	RNase L inhibitor RLI-like, possible metal-binding domain	Domain
JA [auth k1]	IPR003593	AAA+ ATPase domain	Domain
JA [auth k1]	IPR017871	ABC transporter-like, conserved site	Conserved Site
JA [auth k1]	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
JA [auth k1]	IPR003439	ABC transporter-like, ATP-binding domain	Domain
JA [auth k1]	IPR013283	RLI1	Family
JA [auth k1]	IPR034348	RLI, domain 1	Domain
JA [auth k1]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
RA [auth F3]	IPR035808	Large ribosomal subunit protein uL30, eukaryotic/archaeal	Domain
RA [auth F3]	IPR012988	Large ribosomal subunit protein uL30, N-terminal, eukaryotes	Domain
RA [auth F3]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
RA [auth F3]	IPR039699	Large ribosomal subunit protein uL30	Family
RA [auth F3]	IPR005998	Large ribosomal subunit protein uL30, eukaryotic	Family
RA [auth F3]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
TB [auth l3]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
TB [auth l3]	IPR000077	Large ribosomal subunit protein eL39	Family
TB [auth l3]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site