6KFV | pdb_00006kfv

GroEL from Xanthomonas oryzae pv. oryzae


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACpn60_TCP1_1ste6kfvA2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ACpn60_TCP1_2nd_2e6kfvA1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ACpn60_TCP1_3rde6kfvA3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
BCpn60_TCP1_1ste6kfvB3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
BCpn60_TCP1_2nd_2e6kfvB1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
BCpn60_TCP1_3rde6kfvB2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
CCpn60_TCP1_1ste6kfvC2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
CCpn60_TCP1_2nd_2e6kfvC3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
CCpn60_TCP1_3rde6kfvC1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
DCpn60_TCP1_1ste6kfvD3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
DCpn60_TCP1_2nd_2e6kfvD1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
DCpn60_TCP1_3rde6kfvD2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
ECpn60_TCP1_1ste6kfvE3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ECpn60_TCP1_2nd_2e6kfvE2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ECpn60_TCP1_3rde6kfvE1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
FCpn60_TCP1_1ste6kfvF2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
FCpn60_TCP1_2nd_2e6kfvF3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
FCpn60_TCP1_3rde6kfvF1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
GCpn60_TCP1_1ste6kfvG2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
GCpn60_TCP1_2nd_2e6kfvG1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
GCpn60_TCP1_3rde6kfvG3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
HCpn60_TCP1_1ste6kfvH3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
HCpn60_TCP1_2nd_2e6kfvH2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
HCpn60_TCP1_3rde6kfvH1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
ICpn60_TCP1_1ste6kfvI1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ICpn60_TCP1_2nd_2e6kfvI2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ICpn60_TCP1_3rde6kfvI3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
JCpn60_TCP1_1ste6kfvJ3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
JCpn60_TCP1_2nd_2e6kfvJ2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
JCpn60_TCP1_3rde6kfvJ1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
KCpn60_TCP1_1ste6kfvK1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
KCpn60_TCP1_2nd_2e6kfvK3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
KCpn60_TCP1_3rde6kfvK2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
LCpn60_TCP1_1ste6kfvL2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
LCpn60_TCP1_2nd_2e6kfvL1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
LCpn60_TCP1_3rde6kfvL3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
MCpn60_TCP1_1ste6kfvM3 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
MCpn60_TCP1_2nd_2e6kfvM2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
MCpn60_TCP1_3rde6kfvM1 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
NCpn60_TCP1_1ste6kfvN2 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
NCpn60_TCP1_2nd_2e6kfvN1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
NCpn60_TCP1_3rde6kfvN3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
I1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
I3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
J1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
J3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
K1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
K3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
L1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
L3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
M1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
M3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)
N1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (utative)
N3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR018370Chaperonin Cpn60, conserved siteConserved Site
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001844Chaperonin Cpn60/GroELFamily
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily