Cucumber Leaf Spot Virus
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth D] | Viral_coat | e6mrlD2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
| C [auth D] | UNK_F_TYPE | e6mrlD1 | A: beta sandwiches | X: jelly-roll | H: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology) | T: ssRNA positive-strand viruses coat protein P (projecting) domain | F: UNK_F_TYPE | ECOD (1.6) |
| B | Viral_coat | e6mrlB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
| B | UNK_F_TYPE | e6mrlB2 | A: beta sandwiches | X: jelly-roll | H: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology) | T: ssRNA positive-strand viruses coat protein P (projecting) domain | F: UNK_F_TYPE | ECOD (1.6) |
| A | Viral_coat | e6mrlA2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
| A | UNK_F_TYPE | e6mrlA1 | A: beta sandwiches | X: jelly-roll | H: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology) | T: ssRNA positive-strand viruses coat protein P (projecting) domain | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth D] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
| B | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) | |
| A | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, B, C [auth D] | PF00729 | Viral coat protein (S domain) (Viral_coat) | Viral coat protein (S domain) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B, C [auth D] | p41 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B, C [auth D] | IPR029053 | Viral coat protein subunit | Homologous Superfamily |
| A, B, C [auth D] | IPR000937 | Icosahedral viral capsid protein, S domain | Domain |
