6N0M | pdb_00006n0m

CRYSTAL STRUCTURE OF SESTRIN2 IN COMPLEX WITH NV-0005138

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	AhpD-like	8093134	3001907	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	AhpD-like	8093133	3001907	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	AhpD-like	8093133	3001907	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	AhpD-like	8093134	3001907	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	AhpD-like	8093133	3001907	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	AhpD-like	8093134	3001907	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AhpD-like	8093133	3001907	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AhpD-like	8093134	3001907	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	AhpD-like	8093133	3001907	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	AhpD-like	8093134	3001907	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	PA26	e6n0mE1	A: alpha arrays	X: AhpD-like (From Topology)	H: AhpD-like (From Topology)	T: AhpD-like	F: PA26	ECOD (1.6)
D	PA26	e6n0mD1	A: alpha arrays	X: AhpD-like (From Topology)	H: AhpD-like (From Topology)	T: AhpD-like	F: PA26	ECOD (1.6)
C	PA26	e6n0mC1	A: alpha arrays	X: AhpD-like (From Topology)	H: AhpD-like (From Topology)	T: AhpD-like	F: PA26	ECOD (1.6)
B	PA26	e6n0mB1	A: alpha arrays	X: AhpD-like (From Topology)	H: AhpD-like (From Topology)	T: AhpD-like	F: PA26	ECOD (1.6)
A	PA26	e6n0mA1	A: alpha arrays	X: AhpD-like (From Topology)	H: AhpD-like (From Topology)	T: AhpD-like	F: PA26	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF04636	PA26 p53-induced protein (sestrin) (PA26)	PA26 p53-induced protein (sestrin)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Sestrin-2	PH domain binding protein binding binding protein domain specific binding peroxidase activity oxidoreductase activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor catalytic activity GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity molecular function regulator activity PH domain binding protein binding binding protein domain specific binding peroxidase activity oxidoreductase activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor catalytic activity GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity molecular function regulator activity molecular sequestering activity protein sequestering activity cation binding organic acid binding ion binding anion binding L-leucine binding amino acid binding carboxylic acid binding small molecule binding protein-containing complex binding oxidoreductase activity, acting on a sulfur group of donors sulfiredoxin activity	D-glucose import hexose transmembrane transport transport carbohydrate transport establishment of localization transmembrane transport localization D-glucose transmembrane transport cellular process monosaccharide transmembrane transport carbohydrate transmembrane transport regulation of localization regulation of biological process regulation of protein localization D-glucose import hexose transmembrane transport transport carbohydrate transport establishment of localization transmembrane transport localization D-glucose transmembrane transport cellular process monosaccharide transmembrane transport carbohydrate transmembrane transport regulation of localization regulation of biological process regulation of protein localization positive regulation of protein localization to nucleus biological regulation positive regulation of biological process regulation of protein localization to nucleus protein localization to nucleus macromolecule localization protein localization to organelle positive regulation of protein localization intracellular protein localization monosaccharide metabolic process regulation of cellular process gluconeogenesis regulation of primary metabolic process regulation of small molecule metabolic process small molecule metabolic process regulation of carbohydrate metabolic process regulation of glucose metabolic process regulation of biosynthetic process carbohydrate metabolic process small molecule biosynthetic process carbohydrate biosynthetic process hexose metabolic process primary metabolic process monosaccharide biosynthetic process hexose biosynthetic process biosynthetic process regulation of gluconeogenesis metabolic process regulation of carbohydrate biosynthetic process regulation of metabolic process glucose metabolic process reactive oxygen species metabolic process fatty acid metabolic process lipid catabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process lipid modification organic acid metabolic process organic acid catabolic process fatty acid catabolic process monocarboxylic acid catabolic process fatty acid oxidation carboxylic acid catabolic process fatty acid beta-oxidation monocarboxylic acid metabolic process lipid oxidation small molecule catabolic process lipid metabolic process cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus cellular response to stress response to stress response to starvation cellular response to glucose starvation cellular response to starvation chemical homeostasis homeostatic process triglyceride homeostasis acylglycerol homeostasis lipid homeostasis TOR signaling regulation of signaling regulation of TOR signaling signaling regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication regulation of TORC1 signaling signal transduction TORC1 signaling cellular response to leucine starvation cellular response to amino acid starvation response to amino acid starvation regulation of growth regulation of cellular component organization negative regulation of biological process growth negative regulation of cell growth regulation of cell growth cell growth cellular component organization negative regulation of growth negative regulation of cellular process cellular component organization or biogenesis positive regulation of cell communication regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signal transduction positive regulation of response to stimulus intracellular signaling cassette positive regulation of cellular process positive regulation of intracellular signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signaling response to hexose response to monosaccharide response to carbohydrate response to glucose response to chemical response to oxygen-containing compound response to oxidative stress cellular response to chemical stimulus cellular response to oxidative stress cellular response to chemical stress positive regulation of autophagy lipophagy macroautophagy autophagy regulation of catabolic process regulation of autophagy positive regulation of catabolic process positive regulation of metabolic process regulation of macroautophagy positive regulation of lipophagy regulation of lipophagy positive regulation of macroautophagy process utilizing autophagic mechanism positive regulation of TORC1 signaling positive regulation of TOR signaling regulation of cAMP/PKA signal transduction cAMP/PKA signal transduction cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical response to amino acid response to hormone response to endogenous stimulus response to peptide hormone response to insulin response to nitrogen compound negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of cell communication negative regulation of TORC1 signaling negative regulation of TOR signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of protein modification process regulation of protein phosphorylation regulation of phosphate metabolic process phosphate-containing compound metabolic process protein metabolic process protein modification process phosphorus metabolic process protein phosphorylation phosphorylation regulation of protein metabolic process regulation of macromolecule metabolic process macromolecule modification regulation of phosphorylation regulation of phosphorus metabolic process macromolecule metabolic process response to reactive oxygen species regulation of response to reactive oxygen species regulation of response to stress regulation of response to oxidative stress signal transduction by p53 class mediator DNA damage response, signal transduction by p53 class mediator DNA damage response signal transduction in response to DNA damage nucleobase-containing compound metabolic process DNA metabolic process nucleic acid metabolic process mitochondrial DNA metabolic process cellular response to nitrogen compound cellular response to L-leucine cellular response to oxygen-containing compound response to L-leucine negative regulation of translation in response to stress post-transcriptional regulation of gene expression negative regulation of translation regulation of translation in response to stress negative regulation of protein metabolic process negative regulation of macromolecule metabolic process response to endoplasmic reticulum stress negative regulation of translation in response to endoplasmic reticulum stress negative regulation of metabolic process regulation of translation in response to endoplasmic reticulum stress gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process glucose homeostasis carbohydrate homeostasis cellular detoxification detoxification cellular oxidant detoxification cellular response to toxic substance response to toxic substance	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein kinase complex transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex serine/threonine protein kinase complex Atg1/ULK1 kinase complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein kinase complex transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex serine/threonine protein kinase complex Atg1/ULK1 kinase complex transferase complex cytosol TORC2 complex TOR complex intracellular protein-containing complex vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome nucleotide-activated protein kinase complex nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR006730	Sestrin	Family
A, B, C, D, E	IPR029032	AhpD-like	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E	Pharos: P58004	Hepatomegaly medulloblastoma tuberculosis drug-induced liver injury osteosarcoma large cell medulloblastoma Pick disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.