6QFS | pdb_00006qfs

Chargeless variant of the Cellulose-binding domain from Cellulomonas fimi


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6qfsa_ All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Bd6qfsb1 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Bd6qfsb2 Artifacts Tags Tags Tags N-terminal Tags (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Cd6qfsc_ All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Dd6qfsd1 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Dd6qfsd2 Artifacts Tags Tags Tags N-terminal Tags (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Ed6qfse_ All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Fd6qfsf_ All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Gd6qfsg1 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Gd6qfsg2 Artifacts Tags Tags Tags N-terminal Tags (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Hd6qfsh1 All beta proteins Common fold of diphtheria toxin/transcription factors/cytochrome f Carbohydrate-binding domain Cellulose-binding domain family II automated matches (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)
Hd6qfsh2 Artifacts Tags Tags Tags N-terminal Tags (Cellulomonas fimi ) [TaxId: 1708 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCarbohydrate-binding domain 8040183 3000706 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACBM_2e6qfsA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
BCBM_2e6qfsB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
CCBM_2e6qfsC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
DCBM_2e6qfsD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
ECBM_2e6qfsE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
FCBM_2e6qfsF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
GCBM_2e6qfsG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)
HCBM_2e6qfsH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CBM_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
B2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
C2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
D2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
E2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
F2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
G2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)
H2.60.40.290 Mainly Beta Sandwich Immunoglobulin-like CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00553Cellulose binding domain (CBM_2)Cellulose binding domainTwo tryptophan residues are involved in cellulose binding. Cellulose binding domain found in bacteria. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR012291CBM2, carbohydrate-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C, D, E
IPR018366Carbohydrate-binding type-2, conserved siteConserved Site
A, B, C, D, E
IPR008965CBM2/CBM3, carbohydrate-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR031158Glycosyl hydrolases family 10, active siteActive Site
A, B, C, D, E
IPR044846Glycoside hydrolase family 10Family
A, B, C, D, E
IPR001000Glycoside hydrolase family 10 domainDomain
A, B, C, D, E
IPR001919Carbohydrate-binding type-2 domainDomain