Structural basis for recognition and ring-cleavage of the Pseudomonas quinolone signal (PQS) by AqdC variant in complex with its substrate
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth E] | Hydrolase_4_1 | e6rb3E1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
| B [auth A] | Hydrolase_4_1 | e6rb3A1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
| C [auth B] | Hydrolase_4_1 | e6rb3B1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Hydrolase_4_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth E] | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (utative) |
| A [auth E] | 1.10.210.20 | Mainly Alpha | Orthogonal Bundle | Uteroglobin | CATH (utative) | |
| B [auth A] | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (utative) |
| B [auth A] | 1.10.210.20 | Mainly Alpha | Orthogonal Bundle | Uteroglobin | CATH (utative) | |
| C [auth B] | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (utative) |
| C [auth B] | 1.10.210.20 | Mainly Alpha | Orthogonal Bundle | Uteroglobin | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth E], B [auth A], C [auth B] | PF00561 | alpha/beta hydrolase fold (Abhydrolase_1) | alpha/beta hydrolase fold | This catalytic domain is found in a very wide range of enzymes. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth E], B [auth A], C [auth B] | Putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase) | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth E], B [auth A], C [auth B] | IPR000073 | Alpha/beta hydrolase fold-1 | Domain |
| A [auth E], B [auth A], C [auth B] | IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily |
