Structure of the N-terminal catalytic region of T. thermophilus Rel bound to ppGpp
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | HD_4 | e6s2tA1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
| A | RelA_SpoT | e6s2tA2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.3210.10 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | Hypothetical protein af1432 | CATH (utative) |
| A | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13328 | HD domain (HD_4) | HD domain | - | Family | |
| PF04607 | Region found in RelA / SpoT proteins (RelA_SpoT) | Region found in RelA / SpoT proteins | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003607 | HD/PDEase domain | Domain | |
| IPR012676 | TGS-like | Homologous Superfamily | |
| IPR004095 | TGS | Domain | |
| IPR045865 | ACT-like domain | Homologous Superfamily | |
| IPR002912 | ACT domain | Domain | |
| IPR033655 | RelA/SpoT, TGS domain | Domain | |
| IPR004811 | RelA/SpoT family | Family | |
| IPR043519 | Nucleotidyltransferase superfamily | Homologous Superfamily | |
| IPR007685 | RelA/SpoT | Domain | |
| IPR012675 | Beta-grasp domain superfamily | Homologous Superfamily | |
| IPR045600 | RelA/SpoT, AH and RIS domains | Domain | |
| IPR006674 | HD domain | Domain |














