6GV2 | pdb_00006gv2

Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F,A198F variant in complex with L-2-keto, 3-deoxy-galactonate

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd6gv2b_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Aldolase Class I aldolase automated matches (Saccharolobus solfataricus ) [TaxId: 2287 ], SCOPe (2.08)
Ad6gv2a_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Aldolase Class I aldolase automated matches (Saccharolobus solfataricus ) [TaxId: 2287 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDHDPSe6gv2B1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHDPSECOD (1.6)
ADHDPSe6gv2A1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHDPSECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR053415Entner-Doudoroff pathway aldolaseFamily
A, B
IPR013785Aldolase-type TIM barrelHomologous Superfamily
A, B
IPR002220DapA-likeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
KPI Parent Component: LYS

RESID:  AA0287

PSI-MOD :  N6-pyruvic acid 2-iminyl-L-lysine MOD:00292