Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyUBC-like8095691 3000570 SCOP2B (2022-06-29)
B [auth F]SCOP2B SuperfamilyUBC-like8095691 3000570 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyUBC-like8095691 3000570 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyUBC-like8095691 3000570 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyE2 binding domain-like8003942 3000147 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilySCCH domain-like8003543 3000139 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyFCCH domain-like8003532 3000138 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyCC (catalytic cysteine) domain-like8003552 3000140 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyCC (catalytic cysteine) domain-like8003552 3000140 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilySCCH domain-like8003543 3000139 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyE2 binding domain-like8003942 3000147 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyFCCH domain-like8003532 3000138 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyFCCH domain-like8003532 3000138 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilySCCH domain-like8003543 3000139 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyE2 binding domain-like8003942 3000147 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyCC (catalytic cysteine) domain-like8003552 3000140 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilySCCH domain-like8003543 3000139 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyFCCH domain-like8003532 3000138 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyCC (catalytic cysteine) domain-like8003552 3000140 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8017546 3000112 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyE2 binding domain-like8003942 3000147 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyActivating enzymes of the ubiquitin-like proteins8003540 3000112 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]UQ_cone6zhuB1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
B [auth F]UQ_cone6zhuF1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
C [auth D]UQ_cone6zhuD1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
D [auth H]UQ_cone6zhuH1 A: a+b two layersX: UBC-likeH: UBC-like (From Topology)T: UBC-likeF: UQ_conECOD (1.6)
E [auth A]E1_FCCHe6zhuA6 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: E1_FCCHECOD (1.6)
E [auth A]UBA_e1_thiolCyse6zhuA5 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: UBA_e1_thiolCysECOD (1.6)
E [auth A]ThiF_3e6zhuA1 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: ThiF_3ECOD (1.6)
E [auth A]E1_UFDe6zhuA2 A: a+b two layersX: beta-GraspH: E2-binding domain of E1 (From Topology)T: E2-binding domain of E1F: E1_UFDECOD (1.6)
E [auth A]ThiF_1e6zhuA4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_1ECOD (1.6)
E [auth A]ThiF_3e6zhuA3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_3ECOD (1.6)
F [auth E]E1_FCCHe6zhuE5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: E1_FCCHECOD (1.6)
F [auth E]UBA_e1_thiolCyse6zhuE4 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: UBA_e1_thiolCysECOD (1.6)
F [auth E]ThiF_3e6zhuE3 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: ThiF_3ECOD (1.6)
F [auth E]E1_UFDe6zhuE2 A: a+b two layersX: beta-GraspH: E2-binding domain of E1 (From Topology)T: E2-binding domain of E1F: E1_UFDECOD (1.6)
F [auth E]ThiF_1e6zhuE6 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_1ECOD (1.6)
F [auth E]ThiF_3e6zhuE1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_3ECOD (1.6)
G [auth C]E1_FCCHe6zhuC3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: E1_FCCHECOD (1.6)
G [auth C]UBA_e1_thiolCyse6zhuC1 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: UBA_e1_thiolCysECOD (1.6)
G [auth C]ThiF_3e6zhuC2 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: ThiF_3ECOD (1.6)
G [auth C]E1_UFDe6zhuC6 A: a+b two layersX: beta-GraspH: E2-binding domain of E1 (From Topology)T: E2-binding domain of E1F: E1_UFDECOD (1.6)
G [auth C]ThiF_1e6zhuC5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_1ECOD (1.6)
G [auth C]ThiF_3e6zhuC4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_3ECOD (1.6)
H [auth G]E1_FCCHe6zhuG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: E1_FCCHECOD (1.6)
H [auth G]UBA_e1_thiolCyse6zhuG3 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: UBA_e1_thiolCysECOD (1.6)
H [auth G]ThiF_3e6zhuG5 A: alpha arraysX: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)H: Catalytic cysteine domain in ubiquitin-activating enzyme (From Topology)T: Catalytic cysteine domain in ubiquitin-activating enzymeF: ThiF_3ECOD (1.6)
H [auth G]E1_UFDe6zhuG6 A: a+b two layersX: beta-GraspH: E2-binding domain of E1 (From Topology)T: E2-binding domain of E1F: E1_UFDECOD (1.6)
H [auth G]ThiF_1e6zhuG2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_1ECOD (1.6)
H [auth G]ThiF_3e6zhuG4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Activating enzymes of the ubiquitin-like proteinsF: ThiF_3ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth F],
C [auth D],
D [auth H]
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
PF00899ThiF family (ThiF)ThiF familyThis domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1 [1-3].Domain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
PF09358Ubiquitin fold domain (E1_UFD)Ubiquitin fold domainThe ubiquitin fold domain is found at the C-terminus of ubiquitin-activating E1 family enzymes. This domain binds to E2 enzymes [1].Domain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
PF10585Ubiquitin-activating enzyme, SCCH domain (UBA_E1_SCCH)Ubiquitin-activating enzyme, SCCH domainUbiquitin-activating enzyme (E1 enzyme) activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free A ...Ubiquitin-activating enzyme (E1 enzyme) activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin-conjugating enzymes (E2) [1]. This domain carries the last of five conserved cysteines that is part of the active site of the enzyme, responsible for ubiquitin thiolester complex formation, the active site being represented by the sequence motif PICTLKNFP [2,3,4]. The catalytic cysteine domain contains the E1 active site cysteine, and is divided in two half-domains, FCCH and SCCH, for 'first' and 'second' catalytic cysteine half-domain, respectively. This is the SCCH domain in which resides the catalytic cysteine [5].
Domain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
PF16190Ubiquitin-activating enzyme E1 FCCH domain (E1_FCCH)Ubiquitin-activating enzyme E1 FCCH domainThis domain is found in the ubiquitin-activating E1 family enzymes [1].Domain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
PF16191Ubiquitin-activating enzyme E1 four-helix bundle (E1_4HB)Ubiquitin-activating enzyme E1 four-helix bundleThis domain is found in the ubiquitin-activating E1 family enzymes [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
B [auth F],
C [auth D],
D [auth H]
Ubiquitin-conjugating enzyme E2-34 kDa
E [auth A],
F [auth E],
G [auth C],
H [auth G]
Ubiquitin-activating enzyme E1 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth F],
C [auth D],
D [auth H]
IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
A [auth B],
B [auth F],
C [auth D],
D [auth H]
IPR000608Ubiquitin-conjugating enzyme E2Domain
A [auth B],
B [auth F],
C [auth D],
D [auth H]
IPR023313Ubiquitin-conjugating enzyme, active siteActive Site
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR042302Ubiquitin-activating enzyme E1, FCCH domain superfamilyHomologous Superfamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR000011Ubiquitin/SUMO-activating enzyme E1-likeFamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR045886ThiF/MoeB/HesA familyFamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR042449Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 1Homologous Superfamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR019572Ubiquitin-activating enzyme, SCCH domainDomain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR042063Ubiquitin-activating enzyme E1, SCCH domainHomologous Superfamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR000594THIF-type NAD/FAD binding foldDomain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR032420Ubiquitin-activating enzyme E1, four-helix bundleDomain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR018075Ubiquitin-activating enzyme E1Family
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR032418Ubiquitin-activating enzyme E1, FCCH domainDomain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR018965Ubiquitin-activating enzyme E1, C-terminalDomain
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR035985Ubiquitin-activating enzymeHomologous Superfamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR033127Ubiquitin-activating enzyme E1, Cys active siteActive Site
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR038252Ubiquitin-activating enzyme E1, C-terminal domain superfamilyHomologous Superfamily
E [auth A],
F [auth E],
G [auth C],
H [auth G]
IPR018074Ubiquitin-activating enzyme E1, conserved siteConserved Site