7ASE | pdb_00007ase

43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth u]	SCOP2B Superfamily	S13-like H2TH domain	8101629	3000053	SCOP2B (2022-06-29)
Y [auth a]	SCOP2B Superfamily	Winged helix DNA-binding domain	8099474	3000034	SCOP2B (2022-06-29)
I [auth r]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8099470	3000100	SCOP2B (2022-06-29)
H [auth p]	SCOP2B Superfamily	WD40 repeat-like	8101627	3001694	SCOP2B (2022-06-29)
VA [auth W]	SCOP2B Superfamily	Ribosomal S3Ae-like	8059222	3002166	SCOP2B (2022-06-29)
OA [auth Q]	SCOP2 Family	Ribosomal protein S14p/S29e	8102904	4003647	SCOP2 (2022-06-29)
OA [auth Q]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8102905	3000068	SCOP2 (2022-06-29)
JA [auth c]	SCOP2B Superfamily	Ribosomal protein S30e-like	8099466	3002190	SCOP2B (2022-06-29)
IA [auth b]	SCOP2 Family	Ribosomal protein S8	8102906	4002027	SCOP2 (2022-06-29)
IA [auth b]	SCOP2 Superfamily	Ribosomal protein S8	8102907	3000709	SCOP2 (2022-06-29)
HA [auth O]	SCOP2B Superfamily	Winged helix DNA-binding domain	8099472	3000034	SCOP2B (2022-06-29)
GA [auth N]	SCOP2B Superfamily	Winged helix DNA-binding domain	8099478	3000034	SCOP2B (2022-06-29)
EA [auth L]	SCOP2B Superfamily	Ribosomal protein S10	8099462	3001336	SCOP2B (2022-06-29)
AA [auth h]	SCOP2B Superfamily	L30e-like	8099460	3001739	SCOP2B (2022-06-29)
X [auth g]	SCOP2 Family	Ribosomal protein S21e	8102792	4006215	SCOP2 (2022-06-29)
X [auth g]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8102793	3000068	SCOP2 (2022-06-29)
V [auth F]	SCOP2 Family	Ribosomal protein S2-like	8102902	4003744	SCOP2 (2022-06-29)
V [auth F]	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8102903	3001397	SCOP2 (2022-06-29)
S [auth v]	SCOP2B Superfamily	Translational machinery components	8099464	3000571	SCOP2B (2022-06-29)
R [auth U]	SCOP2 Family	Cold shock DNA-binding domain-like	8102772	4001909	SCOP2 (2022-06-29)
R [auth U]	SCOP2 Superfamily	Nucleic acid-binding proteins	8102773	3000135	SCOP2 (2022-06-29)
Q [auth t]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8059226	3000068	SCOP2B (2022-06-29)
M [auth o]	SCOP2B Superfamily	Ribosomal protein S7	8066023	3000799	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth u]	Ribosomal_S13	e7aseu1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
Y [auth a]	Ribosomal_S25	e7asea1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
I [auth r]	Ribosomal_S9	e7aser1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
H [auth p]	ANAPC4_WD40_1	e7asep1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_1	ECOD (1.6)
F [auth j]	Ribosomal_S27	e7asej1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
ZA [auth l]	Ribosomal_S4e	e7asel3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
ZA [auth l]	40S_S4_C	e7asel2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
ZA [auth l]	RS4NT	e7asel1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
XA [auth H]	JAB_1	e7aseH1	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: JAB_1	ECOD (1.6)
E [auth s]	S1_1	e7ases3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: S1_1	ECOD (1.6)
E [auth s]	EIF_2_alpha_N	e7ases1	A: alpha arrays	X: HhH/H2TH	H: eIF2alpha middle domain (From Topology)	T: eIF2alpha middle domain	F: EIF_2_alpha_N	ECOD (1.6)
E [auth s]	EIF_2_alpha_C	e7ases2	A: a+b two layers	X: Alpha-beta plaits	H: eIF-2-alpha, C-terminal domain (From Topology)	T: eIF-2-alpha, C-terminal domain	F: EIF_2_alpha_C	ECOD (1.6)
VA [auth W]	Ribosomal_S3Ae_N	e7aseW2	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
VA [auth W]	Ribosomal_S3Ae_C	e7aseW1	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
SA [auth T]	Ribosomal_S19	e7aseT1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
RA [auth K]	F_UNCLASSIFIED	e7aseK1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: F_UNCLASSIFIED	ECOD (1.6)
RA [auth K]	F_UNCLASSIFIED	e7aseK2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
QA [auth G]	JAB_1	e7aseG1	A: a+b three layers	X: Cytidine deaminase-like (From Topology)	H: Cytidine deaminase-like (From Topology)	T: Cytidine deaminase-like	F: JAB_1	ECOD (1.6)
QA [auth G]	F_UNCLASSIFIED	e7aseG2	A: extended segments	X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology)	T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	F: F_UNCLASSIFIED	ECOD (1.6)
PA [auth D]	Ribosomal_L41	e7aseD1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: Ribosomal_L41	ECOD (1.6)
OA [auth Q]	Ribosomal_S14_2	e7aseQ1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
NA [auth Y]	W2	e7aseY1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: W2	ECOD (1.6)
D [auth y]	Ribosomal_S24e	e7asey1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
MA [auth E]	PCI	e7aseE2	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PCI	ECOD (1.6)
MA [auth E]	eIF3_N	e7aseE1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: eIF3_N	ECOD (1.6)
KA [auth V]	SUI1	e7aseV1	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: SUI1	ECOD (1.6)
JA [auth c]	Ribosomal_S30	e7asec1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
IA [auth b]	Ribosomal_S8_N_1	e7aseb2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
IA [auth b]	Ribosomal_S8_C_1	e7aseb1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
HA [auth O]	Ribosomal_S19e	e7aseO1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
GA [auth N]	S10_plectin	e7aseN1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
FA [auth M]	Ribosomal_S3_C	e7aseM2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
FA [auth M]	KH_2_3	e7aseM1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
EA [auth L]	Ribosomal_S10_1	e7aseL1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
DA [auth i]	Ribosomal_S17e	e7asei1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
CA [auth P]	Ribosomal_S6e	e7aseP1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
BA [auth 5]	GTP_EFTU_D2_1	e7ase53	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D2_1	ECOD (1.6)
BA [auth 5]	eIF2_C	e7ase54	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Aminomethyltransferase beta-barrel domain	F: eIF2_C	ECOD (1.6)
BA [auth 5]	MnmE_helical_2nd	e7ase52	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
BA [auth 5]	KOG0466	e7ase51	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: KOG0466	ECOD (1.6)
AA [auth h]	Ribosomal_L7Ae	e7aseh1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
Z [auth J]	F_UNCLASSIFIED	e7aseJ1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: F_UNCLASSIFIED	ECOD (1.6)
Z [auth J]	RRM_1_4	e7aseJ3	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: RRM_1_4	ECOD (1.6)
Z [auth J]	RRM_1_6	e7aseJ2	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: RRM_1_6	ECOD (1.6)
X [auth g]	Ribosomal_S21e	e7aseg1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
W [auth d]	Ribosomal_S5_C_1	e7ased3	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
W [auth d]	Ribosomal_S5_3	e7ased2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
W [auth d]	Ribosomal_S5_2	e7ased1	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
V [auth F]	Ribosomal_S2_2	e7aseF1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
U [auth B]	S4	e7aseB1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
T [auth X]	Ribosomal_S17_1	e7aseX1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
S [auth v]	Ribosomal_S11	e7asev1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
R [auth U]	Ribosomal_S28e	e7aseU1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
Q [auth t]	Ribosomal_S26e	e7aset1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
P [auth S]	Ribosomal_S27e	e7aseS1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
O [auth R]	Ribosomal_S13_N_1	e7aseR1	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N_1	ECOD (1.6)
O [auth R]	Ribosomal_S15_2	e7aseR2	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
N [auth q]	Ribosomal_S7e_C	e7aseq1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C	ECOD (1.6)
N [auth q]	Ribosomal_S7e_N	e7aseq2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
M [auth o]	Ribosomal_S7_1	e7aseo1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
L [auth Z]	Ribosomal_S8e	e7aseZ1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
K [auth m]	Ribosom_S12_S23	e7asem1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
YA [auth A]	PF05091	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (eIF-3_zeta)	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	-	Family
XA [auth H]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
VA [auth W]	PF01176	Translation initiation factor 1A / IF-1 (eIF-1a)	Translation initiation factor 1A / IF-1	This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1.	Domain
TA [auth C]	PF05470	Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N)	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	-	Repeat
SA [auth T]	PF01283	Ribosomal protein S26e (Ribosomal_S26e)	Ribosomal protein S26e	-	Family
SA [auth T]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
RA [auth K]	PF10075	CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)	CSN8/PSMD8/EIF3K family	-	Family
QA [auth G]	PF01249	Ribosomal protein S21e (Ribosomal_S21e)	Ribosomal protein S21e	-	Family
PA [auth D]	PF05162	Ribosomal protein L41 (Ribosomal_L41)	Ribosomal protein L41	-	Family
OA [auth Q]	PF01251	Ribosomal protein S7e (Ribosomal_S7e)	Ribosomal protein S7e	-	Family
OA [auth Q]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
NA [auth Y]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
MA [auth E]	PF01399	PCI domain (PCI)	PCI domain	This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].	Domain
KA [auth V]	PF01253	Translation initiation factor SUI1 (SUI1)	Translation initiation factor SUI1		Domain
KA [auth V]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
HA [auth O]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
HA [auth O]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
FA [auth M]	PF07650	KH domain (KH_2)	KH domain		Domain
FA [auth M]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
FA [auth M]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
EA [auth L]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
EA [auth L]	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
EA [auth L]	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
EA [auth L]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
CA [auth P]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family
CA [auth P]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
BA [auth 5]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
BA [auth 5]	PF09173	Initiation factor eIF2 gamma, C terminal (eIF2_C)	Initiation factor eIF2 gamma, C terminal	Members of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1].	Domain
Z [auth J]	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain
Z [auth J]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
V [auth F]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
V [auth F]	PF23002	ATP-dependent RNA helicase DDX60, PIN-like domain (PIN-like_DDX60)	ATP-dependent RNA helicase DDX60, PIN-like domain	This domain is found N-terminal in the homologues of ATP-dependent RNA helicase DDX60 (also known as DEAD-box RNA helicase). This helicase binds ssRNA, dsRNA and dsDNA and can promote the binding of RIGI to dsRNA. DDX60 is non-essential in mammals [1 ...	This domain is found N-terminal in the homologues of ATP-dependent RNA helicase DDX60 (also known as DEAD-box RNA helicase). This helicase binds ssRNA, dsRNA and dsDNA and can promote the binding of RIGI to dsRNA. DDX60 is non-essential in mammals [1] but it is required for the cell fitness in kinetoplastids and trypanosomatids and plays a specific role in translation initiation in these parasites [2]. In Trypanosoma cruzi, k-DDX60 binds both to the head and the body of the 40S ribosome subunit. It is also involved in the stabilization of the 43S PIC and the remodeling of the 43S PIC mRNA channel [2]. The domain represented by this entry adopts a globular structure with a significant structural similarity to PIN domains.	Domain
U [auth B]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
U [auth B]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
U [auth B]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
T [auth X]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
T [auth X]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
R [auth U]	PF01200	Ribosomal protein S28e (Ribosomal_S28e)	Ribosomal protein S28e	-	Family
P [auth S]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
O [auth R]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
O [auth R]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
L [auth Z]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth 1]	initiator tRNA-Met	-	-	-
C [auth 0]	18S	-	-	-
J [auth u]	40S ribosomal protein S18, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome
Y [auth a]	40S ribosomal protein S25	-	-	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
I [auth r]	40S ribosomal protein S16, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process ribosomal small subunit biogenesis nucleic acid metabolic process biosynthetic process cellular process metabolic process macromolecule metabolic process protein metabolic process translation	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
H [auth p]	Guanine nucleotide-binding protein subunit beta-like protein	translation regulator activity kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	-	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
G [auth n]	Translation initiation factor, putative	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding mRNA binding protein binding translation initiation factor binding	ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process formation of translation preinitiation complex	protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm eukaryotic translation initiation factor 2 complex
F [auth j]	60S ribosomal protein L40	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
ZA [auth l]	40S ribosomal protein S4	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
YA [auth A]	Eukaryotic translation initiation factor 3 subunit 7-like protein, putative	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding	-	eukaryotic translation initiation factor 3 complex protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm
XA [auth H]	eIF3H	-	-	-
E [auth s]	Elongation initiation factor 2 alpha subunit, putative	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm eukaryotic translation initiation factor 2 complex ribonucleoprotein complex eukaryotic 48S preinitiation complex cytosolic translation preinitiation complex
WA [auth I]	Eukaryotic translation initiation factor 3 (EIF-3) interacting protein, putative	translation factor activity translation initiation factor activity	-	cellular anatomical structure membrane eukaryotic translation initiation factor 3 complex protein-containing complex intracellular anatomical structure cytoplasm
VA [auth W]	40S ribosomal protein S3a-2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
UA [auth 8]	eIF3A	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding mRNA binding	primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process translation reinitiation cytoplasmic translation cytoplasmic translational initiation metabolic process cellular process translational initiation protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process translation reinitiation cytoplasmic translation cytoplasmic translational initiation metabolic process cellular process translational initiation protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis	eukaryotic translation initiation factor 3 complex protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic translation initiation factor 3 complex, eIF3e cytoplasm ribonucleoprotein complex multi-eIF complex eukaryotic translation initiation factor 3 complex, eIF3m
TA [auth C]	Eukaryotic translation initiation factor 3 subunit 8, putative	translation factor activity translation initiation factor activity protein binding binding translation initiation factor binding RNA binding nucleic acid binding	-	eukaryotic translation initiation factor 3 complex protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm
SA [auth T]	40S ribosomal protein S15, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
RA [auth K]	CSN8_PSD8_EIF3K domain-containing protein	translation factor activity translation initiation factor activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	regulation of cellular process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation regulation of cellular process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	eukaryotic translation initiation factor 3 complex protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm
QA [auth G]	JAB_MPN domain-containing protein	peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity	-	-
PA [auth D]	eL41	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
OA [auth Q]	Ribosomal protein S29, putative	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
NA [auth Y]	Eukaryotic translation initiation factor 5, putative	translation factor activity translation initiation factor activity protein binding binding eukaryotic initiation factor eIF2 binding translation initiation factor binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding translation factor activity translation initiation factor activity protein binding binding eukaryotic initiation factor eIF2 binding translation initiation factor binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity molecular function regulator activity	ribonucleoprotein complex biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly ribonucleoprotein complex biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
D [auth y]	40S ribosomal protein S24	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
MA [auth E]	Eukaryotic translation initiation factor 3 subunit E	translation factor activity translation initiation factor activity	ribonucleoprotein complex biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly ribonucleoprotein complex biogenesis protein-containing complex organization formation of cytoplasmic translation initiation complex primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure eukaryotic 43S preinitiation complex ribonucleoprotein complex cytosolic translation preinitiation complex cytoplasm eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic translation initiation factor 3 complex, eIF3e
LA [auth w]	Putative eukaryotic translation initiation factor 1A	translation factor activity translation initiation factor activity RNA binding binding nucleic acid binding	-	-
KA [auth V]	Protein translation factor SUI1 homolog, putative	translation factor activity translation initiation factor activity	-	-
JA [auth c]	40S ribosomal protein S30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
IA [auth b]	40S ribosomal protein S15a, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
HA [auth O]	Ribosomal protein S19, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
GA [auth N]	40S ribosomal protein S10, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	-	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
FA [auth M]	40S ribosomal protein S3, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle
EA [auth L]	Ribosomal protein S20, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
DA [auth i]	40S ribosomal protein S17, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
CA [auth P]	40S ribosomal protein S6	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
BA [auth 5]	Eukaryotic translation initiation factor 2 subunit, putative	translation factor activity translation initiation factor activity RNA binding binding tRNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding translation factor activity translation initiation factor activity RNA binding binding tRNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process formation of translation preinitiation complex	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex eukaryotic translation initiation factor 2 complex
AA [auth h]	40S ribosomal protein S12	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Z [auth J]	RNA-binding protein, putative	RNA binding binding nucleic acid binding mRNA binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
X [auth g]	Putative 40S ribosomal protein S21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
W [auth d]	40S ribosomal protein S2, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
V [auth F]	40S ribosomal protein SA	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
U [auth B]	Putative 40S ribosomal protein S9	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
T [auth X]	40S ribosomal protein S11, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
S [auth v]	40S ribosomal protein S14, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
R [auth U]	40S ribosomal protein S33	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process maturation of SSU-rRNA metabolic process macromolecule metabolic process RNA processing rRNA metabolic process protein metabolic process translation	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
Q [auth t]	40S ribosomal protein S26	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
P [auth S]	40S ribosomal protein S27, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
O [auth R]	40S ribosomal protein S13, putative	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
N [auth q]	40S ribosomal protein S7	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process ribosomal small subunit biogenesis protein metabolic process translation	90S preribosome preribosome protein-containing complex ribonucleoprotein complex cytosolic small ribosomal subunit intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle 90S preribosome preribosome protein-containing complex ribonucleoprotein complex cytosolic small ribosomal subunit intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle ribosome cytoplasm cytosol small-subunit processome
M [auth o]	40S ribosomal protein S5, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
L [auth Z]	40S ribosomal protein S8	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
K [auth m]	40S ribosomal protein S23, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
A [auth f]	kDDX60	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity hydrolase activity nucleic acid binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J [auth u]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
J [auth u]	IPR001892	Small ribosomal subunit protein uS13	Family
J [auth u]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
J [auth u]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
Y [auth a]	IPR004977	Small ribosomal subunit protein eS25	Family
I [auth r]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
I [auth r]	IPR000754	Small ribosomal subunit protein uS9	Family
I [auth r]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
H [auth p]	IPR045223	Small ribosomal subunit protein RACK1-like	Family
H [auth p]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
H [auth p]	IPR001680	WD40 repeat	Repeat
H [auth p]	IPR019775	WD40 repeat, conserved site	Conserved Site
H [auth p]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
H [auth p]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
G [auth n]	IPR016190	Translation initiation factor IF2/IF5, zinc-binding	Homologous Superfamily
G [auth n]	IPR002735	Translation initiation factor IF2/IF5 domain	Domain
G [auth n]	IPR016189	Translation initiation factor IF2/IF5, N-terminal	Homologous Superfamily
G [auth n]	IPR045196	Translation initiation factor IF2/IF5	Family
F [auth j]	IPR002906	Small ribosomal subunit protein eS31	Domain
F [auth j]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
F [auth j]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
F [auth j]	IPR000626	Ubiquitin-like domain	Domain
F [auth j]	IPR038582	Small ribosomal subunit protein eS31 eukaryotic-type superfamily	Homologous Superfamily
ZA [auth l]	IPR013843	Small ribosomal subunit protein eS4, N-terminal	Domain
ZA [auth l]	IPR032277	Small ribosomal subunit protein eS4, C-terminal domain	Domain
ZA [auth l]	IPR002942	RNA-binding S4 domain	Domain
ZA [auth l]	IPR013845	Small ribosomal subunit protein eS4, central region	Domain
ZA [auth l]	IPR000876	Small ribosomal subunit protein eS4	Family
ZA [auth l]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
ZA [auth l]	IPR038237	Small ribosomal subunit protein eS4, central domain superfamily	Homologous Superfamily
ZA [auth l]	IPR041982	Small ribosomal subunit protein eS4, KOW domain	Domain
ZA [auth l]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
ZA [auth l]	IPR005824	KOW	Domain
YA [auth A]	IPR007783	Eukaryotic translation initiation factor 3 subunit D	Family
E [auth s]	IPR003029	S1 domain	Domain
E [auth s]	IPR044126	IF2a, S1-like domain	Domain
E [auth s]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
E [auth s]	IPR024055	Translation initiation factor 2, alpha subunit, C-terminal	Homologous Superfamily
E [auth s]	IPR024054	Translation initiation factor 2, alpha subunit, middle domain superfamily	Homologous Superfamily
E [auth s]	IPR011488	Translation initiation factor 2, alpha subunit	Family
WA [auth I]	IPR019382	Translation initiation factor 3 complex subunit L	Family
VA [auth W]	IPR001593	Small ribosomal subunit protein eS1	Family
VA [auth W]	IPR027500	Small ribosomal subunit protein eS1, eukaryotes	Family
UA [auth 8]	IPR027512	Eukaryotic translation initiation factor 3 subunit A	Family
TA [auth C]	IPR027516	Eukaryotic translation initiation factor 3 subunit C	Family
TA [auth C]	IPR008905	Eukaryotic translation initiation factor 3 subunit C, N-terminal domain	Domain
SA [auth T]	IPR002222	Small ribosomal subunit protein uS19	Family
SA [auth T]	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
SA [auth T]	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
SA [auth T]	IPR005713	Small ribosomal subunit protein uS19, eukaryotic/archaeal	Family
RA [auth K]	IPR016020	Translation initiation factor 3, subunit 12, N-terminal, eukaryotic	Homologous Superfamily
RA [auth K]	IPR016024	Armadillo-type fold	Homologous Superfamily
RA [auth K]	IPR033464	CSN8/PSMD8/EIF3K	Domain
RA [auth K]	IPR009374	Eukaryotic translation initiation factor 3 subunit K	Family
QA [auth G]	IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	Domain
PA [auth D]	IPR007836	Large ribosomal subunit protein eS32	Family
OA [auth Q]	IPR001209	Small ribosomal subunit protein uS14	Family
OA [auth Q]	IPR039744	Small ribosomal subunit protein uS14, eukaryotes/archaea	Family
OA [auth Q]	IPR043140	Small ribosomal subunit protein uS14 superfamily	Homologous Superfamily
NA [auth Y]	IPR016190	Translation initiation factor IF2/IF5, zinc-binding	Homologous Superfamily
NA [auth Y]	IPR002735	Translation initiation factor IF2/IF5 domain	Domain
NA [auth Y]	IPR016189	Translation initiation factor IF2/IF5, N-terminal	Homologous Superfamily
NA [auth Y]	IPR003307	W2 domain	Domain
NA [auth Y]	IPR045196	Translation initiation factor IF2/IF5	Family
D [auth y]	IPR053709	Eukaryotic Ribosomal Protein eS24	Homologous Superfamily
D [auth y]	IPR001976	Small ribosomal subunit protein eS24	Family
D [auth y]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
D [auth y]	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
MA [auth E]	IPR000717	Proteasome component (PCI) domain	Domain
MA [auth E]	IPR016650	Eukaryotic translation initiation factor 3 subunit E	Family
MA [auth E]	IPR019010	Eukaryotic translation initiation factor 3 subunit E, N-terminal	Domain
MA [auth E]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
LA [auth w]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
LA [auth w]	IPR006196	RNA-binding domain, S1, IF1 type	Domain
LA [auth w]	IPR001253	Translation initiation factor 1A (eIF-1A)	Family
KA [auth V]	IPR005874	Eukaryotic translation initiation factor SUI1	Family
KA [auth V]	IPR001950	SUI1 domain	Domain
KA [auth V]	IPR036877	SUI1 domain superfamily	Homologous Superfamily
JA [auth c]	IPR006846	Small ribosomal subunit protein eS30	Family
IA [auth b]	IPR000630	Small ribosomal subunit protein uS8	Family
IA [auth b]	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
IA [auth b]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
HA [auth O]	IPR001266	Small ribosomal subunit protein eS19	Family
HA [auth O]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
HA [auth O]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
GA [auth N]	IPR037447	Small ribosomal subunit protein eS10	Family
GA [auth N]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
GA [auth N]	IPR005326	Plectin/eS10, N-terminal	Domain
FA [auth M]	IPR004044	K Homology domain, type 2	Domain
FA [auth M]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
FA [auth M]	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
FA [auth M]	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
FA [auth M]	IPR005703	Small ribosomal subunit protein uS3, eukaryotic/archaeal	Family
FA [auth M]	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
EA [auth L]	IPR001848	Small ribosomal subunit protein uS10	Family
EA [auth L]	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
EA [auth L]	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
EA [auth L]	IPR005729	Small ribosomal subunit protein uS10, eukaryotic/archaeal	Family
DA [auth i]	IPR036401	Small ribosomal subunit protein eS17 superfamily	Homologous Superfamily
DA [auth i]	IPR001210	Small ribosomal subunit protein eS17	Family
CA [auth P]	IPR014401	Small ribosomal subunit protein eS6-like	Family
CA [auth P]	IPR001377	Small ribosomal subunit protein eS6	Family
BA [auth 5]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
BA [auth 5]	IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Homologous Superfamily
BA [auth 5]	IPR050543	Eukaryotic Initiation Factor 2 Gamma Subunit	Family
BA [auth 5]	IPR044128	Initiation factor eIF2 gamma, GTP-binding domain	Domain
BA [auth 5]	IPR015256	Initiation factor eIF2 gamma, C-terminal	Domain
BA [auth 5]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
BA [auth 5]	IPR044127	Initiation factor eIF2 gamma, domain 2	Domain
BA [auth 5]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AA [auth h]	IPR000530	Small ribosomal subunit protein eS12	Family
AA [auth h]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
AA [auth h]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
AA [auth h]	IPR047860	Small ribosomal subunit protein eS12, conserved site	Conserved Site
Z [auth J]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
Z [auth J]	IPR000504	RNA recognition motif domain	Domain
Z [auth J]	IPR050374	RRT5/SRSF/Splicing Factor SR	Family
Z [auth J]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
X [auth g]	IPR038579	Small ribosomal subunit protein eS21 superfamily	Homologous Superfamily
X [auth g]	IPR001931	Small ribosomal subunit protein eS21	Family
W [auth d]	IPR000851	Small ribosomal subunit protein uS5	Family
W [auth d]	IPR005711	Small ribosomal subunit protein uS5, eukaryotic/archaeal	Family
W [auth d]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
W [auth d]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
W [auth d]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
W [auth d]	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
W [auth d]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
V [auth F]	IPR005707	Small ribosomal subunit protein uS2, eukaryotic/archaeal	Family
V [auth F]	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
V [auth F]	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
V [auth F]	IPR001865	Small ribosomal subunit protein uS2	Family
V [auth F]	IPR027498	Small ribosomal subunit protein uS2, eukaryotic	Family
U [auth B]	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
U [auth B]	IPR002942	RNA-binding S4 domain	Domain
U [auth B]	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
U [auth B]	IPR005710	Small ribosomal subunit protein uS4, eukaryotic/archaeal	Family
U [auth B]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
U [auth B]	IPR022801	Small ribosomal subunit protein uS4	Family
T [auth X]	IPR019979	Small ribosomal subunit protein uS17, conserved site	Conserved Site
T [auth X]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
T [auth X]	IPR000266	Small ribosomal subunit protein uS17	Family
T [auth X]	IPR032440	Small ribosomal subunit protein uS17, N-terminal	Domain
S [auth v]	IPR001971	Small ribosomal subunit protein uS11	Family
S [auth v]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
S [auth v]	IPR018102	Small ribosomal subunit protein uS11, conserved site	Conserved Site
R [auth U]	IPR028626	Ribosomal protein eS28 conserved site	Conserved Site
R [auth U]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
R [auth U]	IPR000289	Small ribosomal subunit protein eS28	Family
Q [auth t]	IPR038551	Ribosomal protein eS26 superfamily	Homologous Superfamily
Q [auth t]	IPR000892	Small ribosomal subunit protein eS26	Family
P [auth S]	IPR023407	Small ribosomal subunit protein eS27, zinc-binding domain superfamily	Homologous Superfamily
P [auth S]	IPR000592	Small ribosomal subunit protein eS27	Family
P [auth S]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
O [auth R]	IPR012606	Small ribosomal subunit protein uS15, N-terminal	Domain
O [auth R]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
O [auth R]	IPR023029	Small ribosomal subunit protein uS15, archaea/eukaryotes	Family
O [auth R]	IPR000589	Small ribosomal subunit protein uS15	Family
N [auth q]	IPR000554	Small ribosomal subunit protein eS7	Family
M [auth o]	IPR020606	Small ribosomal subunit protein uS7, conserved site	Conserved Site
M [auth o]	IPR000235	Small ribosomal subunit protein uS7	Family
M [auth o]	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
M [auth o]	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
M [auth o]	IPR005716	Ribosomal protein uS7, eukaryotic/archaeal	Family
L [auth Z]	IPR001047	Small ribosomal subunit protein eS8	Family
L [auth Z]	IPR022309	Ribosomal protein eS8/ribosomal biogenesis NSA2	Family
L [auth Z]	IPR018283	Small ribosomal subunit protein eS8, conserved site	Conserved Site
K [auth m]	IPR006032	Small ribosomal subunit protein uS12	Family
K [auth m]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
K [auth m]	IPR005680	Small ribosomal subunit protein uS12, eukaryotic/archaeal	Family
A [auth f]	IPR052431	SKI2 subfamily ATP-dependent RNA helicases	Family
A [auth f]	IPR001650	Helicase, C-terminal domain-like	Domain
A [auth f]	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A [auth f]	IPR055124	ATP-dependent RNA helicase DDX60, PIN-like domain	Domain
A [auth f]	IPR011545	DEAD/DEAH-box helicase domain	Domain
A [auth f]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily