7EQD | pdb_00007eqd

STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOSPIRILLUM RUBRUM

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Y [auth Z]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
W [auth X]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
U [auth V]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
S [auth T]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
Q [auth R]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
O [auth P]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
M [auth N]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
IA [auth 0]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
I [auth G]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
GA [auth 8]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
EA [auth 6]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
CA [auth 4]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
AA [auth 2]	SCOP2B Superfamily	Light-harvesting complex subunits	8076357	3000199	SCOP2B (2022-06-29)
Z [auth 1]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
X [auth Y]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
V [auth W]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
T [auth U]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
R [auth S]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
P [auth Q]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
N [auth O]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
L [auth K]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
HA [auth 9]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
H [auth F]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
FA [auth 7]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
DA [auth 5]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
D [auth A]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
BA [auth 3]	SCOP2B Superfamily	Light-harvesting complex subunits	8033868	3000199	SCOP2B (2022-06-29)
B [auth M]	SCOP2 Family	Bacterial photosystem II reaction centre, L and M subunits	8103976	4002035	SCOP2 (2022-06-29)
B [auth M]	SCOP2 Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8103977	3000736	SCOP2 (2022-06-29)
A [auth L]	SCOP2 Family	Bacterial photosystem II reaction centre, L and M subunits	8103952	4002035	SCOP2 (2022-06-29)
A [auth L]	SCOP2 Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8103953	3000736	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y [auth Z]	LHC_like	e7eqdZ1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
W [auth X]	LHC_like	e7eqdX1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
U [auth V]	LHC_like	e7eqdV1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
S [auth T]	LHC_like	e7eqdT1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
Q [auth R]	LHC_like	e7eqdR1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
O [auth P]	LHC_like	e7eqdP1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
M [auth N]	LHC_like	e7eqdN1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
K [auth J]	LHC_like	e7eqdJ1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
IA [auth 0]	LHC_like	e7eqd01	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
I [auth G]	LHC_like	e7eqdG1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
GA [auth 8]	LHC_like	e7eqd81	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
G [auth E]	LHC_like	e7eqdE1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
EA [auth 6]	LHC_like	e7eqd61	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
E [auth B]	LHC_like	e7eqdB1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
CA [auth 4]	LHC_like	e7eqd41	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
AA [auth 2]	LHC_like	e7eqd21	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
Z [auth 1]	LHC_like	e7eqd11	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
X [auth Y]	LHC_like	e7eqdY1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
V [auth W]	LHC_like	e7eqdW1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
T [auth U]	LHC_like	e7eqdU1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
R [auth S]	LHC_like	e7eqdS1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
P [auth Q]	LHC_like	e7eqdQ1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
N [auth O]	LHC_like	e7eqdO1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
L [auth K]	LHC_like	e7eqdK1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
J [auth I]	LHC_like	e7eqdI1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
HA [auth 9]	LHC_like	e7eqd91	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
H [auth F]	LHC_like	e7eqdF1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
FA [auth 7]	LHC_like	e7eqd71	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
F [auth D]	LHC_like	e7eqdD1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
DA [auth 5]	LHC_like	e7eqd51	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
D [auth A]	LHC_like	e7eqdA1	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
BA [auth 3]	LHC_like	e7eqd31	A: extended segments	X: Bacterial light-harvesting complex subunits (From Topology)	H: Bacterial light-harvesting complex subunits (From Topology)	T: Bacterial light-harvesting complex subunits	F: LHC_like	ECOD (1.6)
C [auth H]	PRCH_C	e7eqdH1	A: beta barrels	X: SH3	H: PRC-barrel domain (From Topology)	T: PRC-barrel domain	F: PRCH_C	ECOD (1.6)
C [auth H]	PRCH_N	e7eqdH2	A: extended segments	X: Photosystem II reaction centre subunit H, transmembrane region (From Topology)	H: Photosystem II reaction centre subunit H, transmembrane region (From Topology)	T: Photosystem II reaction centre subunit H, transmembrane region	F: PRCH_N	ECOD (1.6)
B [auth M]	Photo_RC	e7eqdM1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: Photo_RC	ECOD (1.6)
A [auth L]	Photo_RC	e7eqdL1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: Photo_RC	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
C [auth H]	PF03967	Photosynthetic reaction centre, H-chain N-terminal region (PRCH)	Photosynthetic reaction centre, H-chain N-terminal region	-	Family
C [auth H]	PF05239	PRC-barrel domain (PRC)	PRC-barrel domain	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].	Domain
B [auth M]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
A [auth L]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	Light-harvesting protein B-870 beta chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	Light-harvesting protein B-870 alpha chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle membrane-bounded organelle intracellular organelle organelle envelope organelle inner membrane cellular anatomical structure intracellular anatomical structure organelle membrane organelle membrane cell periphery plasma membrane plasma membrane light-harvesting complex protein-containing complex intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle cytoplasm vesicle
C [auth H]	Photoreaction center protein H	-	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm cellular anatomical structure membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
B [auth M]	Reaction center protein M chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular vesicle light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle vesicle
A [auth L]	Reaction center protein L chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular vesicle light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	IPR000066	Antenna complex, alpha/beta subunit	Domain
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	IPR035889	Light-harvesting complex	Homologous Superfamily
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	IPR023623	Antenna complex, beta subunit, conserved site	Conserved Site
AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], AA [auth 2], CA [auth 4], E [auth B], EA [auth 6], G [auth E], GA [auth 8], I [auth G], IA [auth 0], K [auth J], M [auth N], O [auth P], Q [auth R], S [auth T], U [auth V], W [auth X], Y [auth Z]	IPR002362	Light-harvesting protein B beta chain	Family
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	IPR000066	Antenna complex, alpha/beta subunit	Domain
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	IPR018332	Antenna complex, alpha subunit	Family
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	IPR002361	Antenna complex, alpha subunit conserved site	Conserved Site
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	IPR035889	Light-harvesting complex	Homologous Superfamily
C [auth H]	IPR014747	Bacterial photosynthetic reaction centre, H-chain, C-terminal	Homologous Superfamily
C [auth H]	IPR015810	Photosynthetic reaction centre, H subunit, N-terminal	Domain
C [auth H]	IPR005652	Photosynthetic reaction centre, H subunit	Family
C [auth H]	IPR037097	Photosynthetic reaction centre, H subunit, N-terminal domain superfamily	Homologous Superfamily
C [auth H]	IPR011033	PRC-barrel-like superfamily	Homologous Superfamily
C [auth H]	IPR027275	PRC-barrel domain	Domain
B [auth M]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
B [auth M]	IPR005781	Photosynthetic reaction centre, M subunit	Family
B [auth M]	IPR000484	Photosynthetic reaction centre, L/M	Family
B [auth M]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
A [auth L]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
A [auth L]	IPR000484	Photosynthetic reaction centre, L/M	Family
A [auth L]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
A [auth L]	IPR005871	Photosynthetic reaction centre, L subunit	Family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H] A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H], CA [auth 4], D [auth A], DA [auth 5], E [auth B], EA [auth 6], F [auth D], FA [auth 7], G [auth E], GA [auth 8], H [auth F], HA [auth 9], I [auth G], IA [auth 0], J [auth I], K [auth J], L [auth K], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S], S [auth T], T [auth U], U [auth V], V [auth W], W [auth X], X [auth Y], Y [auth Z], Z [auth 1]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H] A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H], CA [auth 4], D [auth A], DA [auth 5], E [auth B], EA [auth 6], F [auth D], FA [auth 7], G [auth E], GA [auth 8], H [auth F], HA [auth 9], I [auth G], IA [auth 0], J [auth I], K [auth J], L [auth K], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S], S [auth T], T [auth U], U [auth V], V [auth W], W [auth X], X [auth Y], Y [auth Z], Z [auth 1]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H] A [auth L], AA [auth 2], B [auth M], BA [auth 3], C [auth H], CA [auth 4], D [auth A], DA [auth 5], E [auth B], EA [auth 6], F [auth D], FA [auth 7], G [auth E], GA [auth 8], H [auth F], HA [auth 9], I [auth G], IA [auth 0], J [auth I], K [auth J], L [auth K], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S], S [auth T], T [auth U], U [auth V], V [auth W], W [auth X], X [auth Y], Y [auth Z], Z [auth 1]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Light-Harvesting+Reaction Center Complexes	LH1-RC super complex

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], BA [auth 3], D [auth A], DA [auth 5], F [auth D], FA [auth 7], H [auth F], HA [auth 9], J [auth I], L [auth K], N [auth O], P [auth Q], R [auth S], T [auth U], V [auth W], X [auth Y], Z [auth 1]	FME	Parent Component: MET RESID: AA0021 , AA0566 PSI-MOD : N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891