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7F3L
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P62
Present annotations:
Domain Annotation: ECOD Classification
Gene Product Annotation
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
CSD
e7f3lA1
A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins (From Topology)
T: Nucleic acid-binding proteins
F: CSD
ECOD (1.6)
Gene Product Annotation
Gene Product Annotation
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Y-box-binding protein 2
DNA binding
binding
organic cyclic compound binding
nucleic acid binding
heterocyclic compound binding
RNA binding
multicellular organismal process
regulation of biological process
homeostatic process
biological regulation
positive regulation of biological process
adaptive thermogenesis
positive regulation of metabolic process
multicellular organismal-level homeostasis
regulation of cold-induced thermogenesis
cold-induced thermogenesis
temperature homeostasis
positive regulation of cold-induced thermogenesis
positive regulation of multicellular organismal process
metabolic process
multicellular organismal process
regulation of biological process
homeostatic process
biological regulation
positive regulation of biological process
adaptive thermogenesis
positive regulation of metabolic process
multicellular organismal-level homeostasis
regulation of cold-induced thermogenesis
cold-induced thermogenesis
temperature homeostasis
positive regulation of cold-induced thermogenesis
positive regulation of multicellular organismal process
metabolic process
regulation of multicellular organismal process
regulation of metabolic process
developmental process
spermatogenesis
sexual reproduction
reproductive process
multicellular organismal reproductive process
developmental process involved in reproduction
male gamete generation
gamete generation
reproduction
multicellular organism reproduction
cellular biosynthetic process
RNA metabolic process
cellular nitrogen compound biosynthetic process
RNA biosynthetic process
nucleobase-containing compound metabolic process
DNA-templated transcription
transcription by RNA polymerase II
organic substance metabolic process
heterocycle metabolic process
organic substance biosynthetic process
nitrogen compound metabolic process
cellular metabolic process
cellular nitrogen compound metabolic process
primary metabolic process
nucleobase-containing compound biosynthetic process
heterocycle biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
organic cyclic compound metabolic process
biosynthetic process
aromatic compound biosynthetic process
organic cyclic compound biosynthetic process
cellular process
macromolecule metabolic process
cellular aromatic compound metabolic process
regulation of biosynthetic process
regulation of cellular process
regulation of cellular metabolic process
regulation of macromolecule metabolic process
regulation of cellular biosynthetic process
regulation of gene expression
regulation of macromolecule biosynthetic process
cellular developmental process
oogenesis
cell development
cellular process involved in reproduction in multicellular organism
female gamete generation
oocyte development
cell differentiation
anatomical structure development
germ cell development
oocyte differentiation
regulation of amide metabolic process
organonitrogen compound biosynthetic process
regulation of primary metabolic process
regulation of nitrogen compound metabolic process
post-transcriptional regulation of gene expression
translational attenuation
protein metabolic process
amide metabolic process
organonitrogen compound metabolic process
regulation of protein metabolic process
amide biosynthetic process
translation
peptide biosynthetic process
regulation of translation
peptide metabolic process
Less
intracellular anatomical structure
cytoplasm
cellular anatomical entity
membrane-bounded organelle
intracellular organelle
organelle
nucleus
intracellular membrane-bounded organelle
B
RNA (5'-R(P*CP*AP*UP*(5MC))-3')
none
none
none
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