Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyAMPKBI-like8037381 3000446 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyProtein kinase-like (PK-like)8081561 3000066 SCOP2B (2022-06-29)
D [auth M]SCOP2B SuperfamilyType 2 solute binding protein-like8058187 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF04739e7jhgB1 A: a+b two layersX: AMPKBI-like (From Topology)H: AMPKBI-like (From Topology)T: AMPKBI-likeF: PF04739ECOD (1.6)
E [auth L]PF07654e7jhgL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
E [auth L]PF07686e7jhgL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
F [auth H]PF07654e7jhgH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
F [auth H]PF07686e7jhgH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
APF16579e7jhgA2 A: a+b two layersX: TBP-likeH: Kinase associated domain 1, KA1 (From Topology)T: Kinase associated domain 1, KA1F: PF16579ECOD (1.6)
APF00069e7jhgA1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
C [auth G]PF00571e7jhgG2 A: a+b duplicates or obligate multimersX: CBS-domain (From Topology)H: CBS-domain (From Topology)T: CBS-domainF: PF00571ECOD (1.6)
D [auth M]PF01547e7jhgM1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: PF01547ECOD (1.6)
G [auth N]PF07686e7jhgN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
E [auth L]Light ChainIGKV1 Kappa5'-amp-activated protein kinase catalytic subunit alpha-1SAbDab (2024-04-26)
F [auth H]Heavy ChainIGHV3 -5'-amp-activated protein kinase catalytic subunit alpha-1SAbDab (2024-04-26)
G [auth N]Heavy ChainIGHV1 --SAbDab (2024-04-26)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF047395'-AMP-activated protein kinase beta subunit, interaction domain (AMPKBI)5'-AMP-activated protein kinase beta subunit, interaction domain- Family
PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain
C [auth G]PF00571CBS domain (CBS)CBS domainCBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ...CBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands with an adenosyl group such as AMP, ATP and S-AdoMet [5]. CBS domains are found attached to a wide range of other protein domains suggesting that CBS domains may play a regulatory role making proteins sensitive to adenosyl carrying ligands. The region containing the CBS domains in Cystathionine-beta synthase is involved in regulation by S-AdoMet [4]. CBS domain pairs from AMPK bind AMP or ATP [5]. The CBS domains from IMPDH and the chloride channel CLC2 bind ATP [5].
Domain
D [auth M]PF01547Bacterial extracellular solute-binding protein (SBP_bac_1)Bacterial extracellular solute-binding protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
5'-AMP-activated protein kinase subunit beta-2
E [auth L]Fab light chain---
F [auth H]Fab heavy chain---
5'-AMP-activated protein kinase catalytic subunit alpha-1
C [auth G]5'-AMP-activated protein kinase subunit gamma-1
D [auth M]Maltodextrin-binding protein
G [auth N]Nanobody---