7MWX | pdb_00007mwx

Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2 with tamarin CD81


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth D]SCOP2B SuperfamilyTetraspanin 8104363 3001736 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyTetraspanin 8104363 3001736 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth C]HCV_NS1e7mwxC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: HCV envelope glycoprotein E2 (From Topology)T: HCV envelope glycoprotein E2F: HCV_NS1ECOD (1.6)
B [auth G]HCV_NS1e7mwxG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: HCV envelope glycoprotein E2 (From Topology)T: HCV envelope glycoprotein E2F: HCV_NS1ECOD (1.6)
C [auth A]V-set_8e7mwxA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
C [auth A]C1-set_1e7mwxA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
F [auth E]V-set_8e7mwxE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
F [auth E]C1-set_1e7mwxE2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
D [auth B]C1-set_4e7mwxB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
D [auth B]V-sete7mwxB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
G [auth F]C1-set_4e7mwxF2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
G [auth F]V-sete7mwxF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
E [auth D]CD81_like_LELe7mwxD1 A: few secondary structure elementsX: Tetraspanin extracellular domain (From Topology)H: Tetraspanin extracellular domain (From Topology)T: Tetraspanin extracellular domainF: CD81_like_LELECOD (1.6)
HCD81_like_LELe7mwxH1 A: few secondary structure elementsX: Tetraspanin extracellular domain (From Topology)H: Tetraspanin extracellular domain (From Topology)T: Tetraspanin extracellular domainF: CD81_like_LELECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
F [auth E]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D [auth B]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
G [auth F]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth A],
F [auth E]
Heavy ChainIGHV14 -core protein precursor ee2SAbDab (2025-07-04)
D [auth B],
G [auth F]
Light ChainIGKV8 Kappacore protein precursor ee2SAbDab (2025-07-04)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
B [auth G]
Core protein precursor eE2
C [auth A],
F [auth E]
2A12 Fab Heavy Chain---
D [auth B],
G [auth F]
2A12 Fab Light Chain---
E [auth D],
H
CD81 protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C],
B [auth G]
IPR002522Hepatitis C virus, Core protein, N-terminalDomain
A [auth C],
B [auth G]
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A [auth C],
B [auth G]
IPR054175NS3 RNA helicase, C-terminal helical domainDomain
A [auth C],
B [auth G]
IPR011492Non-structural protein NS3-like, DEAD-box helicase, flavivirusDomain
A [auth C],
B [auth G]
IPR038568Hepatitis C virus NS5A, 1B domain superfamilyHomologous Superfamily
A [auth C],
B [auth G]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth C],
B [auth G]
IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth C],
B [auth G]
IPR001650Helicase, C-terminal domain-likeDomain
A [auth C],
B [auth G]
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A [auth C],
B [auth G]
IPR002868Hepatitis C virus, Non-structural 5a proteinDomain
A [auth C],
B [auth G]
IPR038170NS5A domain 1a superfamilyHomologous Superfamily
A [auth C],
B [auth G]
IPR002518Hepatitis C virus, Non-structural protein NS2Domain
A [auth C],
B [auth G]
IPR013192Hepatitis C virus, Non-structural 5a protein, domain 1aDomain
A [auth C],
B [auth G]
IPR002521Hepatitis C virus, Core protein, C-terminalDomain
A [auth C],
B [auth G]
IPR042209Hepatitis C virus non-structural protein NS2, N-terminal domainHomologous Superfamily
A [auth C],
B [auth G]
IPR000745Hepatitis C virus, Non-structural protein NS4aDomain
A [auth C],
B [auth G]
IPR042205Hepatitis C virus non-structural protein NS2, C-terminal domainHomologous Superfamily
A [auth C],
B [auth G]
IPR002166RNA dependent RNA polymerase, hepatitis C virusFamily
A [auth C],
B [auth G]
IPR002519Hepatitis C virus, Envelope glycoprotein E1Domain
A [auth C],
B [auth G]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A [auth C],
B [auth G]
IPR044896Hepatitis C virus core protein, chain A superfamilyHomologous Superfamily
A [auth C],
B [auth G]
IPR024350Hepatitus C virus, Non-structural 5a protein, C-terminalDomain
A [auth C],
B [auth G]
IPR013193Hepatitis C virus non-structural 5a, 1B domainDomain
A [auth C],
B [auth G]
IPR004109Hepatitis C virus, NS3 proteaseDomain
A [auth C],
B [auth G]
IPR049913Hepatitis C virus, p7 channelDomain
A [auth C],
B [auth G]
IPR002531Hepatitis C virus, Non-structural protein E2/NS1Domain
A [auth C],
B [auth G]
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A [auth C],
B [auth G]
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A [auth C],
B [auth G]
IPR001490Hepatitis C virus, Non-structural protein NS4bDomain
E [auth D],
H
IPR008952Tetraspanin, EC2 domain superfamilyHomologous Superfamily
E [auth D],
H
IPR000301Tetraspanin, animalsFamily
E [auth D],
H
IPR018503Tetraspanin, conserved siteConserved Site
E [auth D],
H
IPR018499Tetraspanin/PeripherinFamily