Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyZU5 domain-like 8102799 3002026 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyZU5 domain-like 8102799 3002026 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANucleoporin2e7nqaA1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology)T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-relatedF: Nucleoporin2ECOD (1.6)
C [auth B]Nucleoporin2e7nqaB1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology)T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-relatedF: Nucleoporin2ECOD (1.6)
B [auth D]V-set_8e7nqaD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
D [auth C]V-set_8e7nqaC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth D]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth D],
D [auth C]
Heavy ChainIGHV1 -nuclear pore complex protein nup96SAbDab (2025-09-26)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth B]
PF04096Nup98-96 autopeptidase S59 (Nucleoporin2)Nup98-96 autopeptidase S59The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as n ...The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as nucleoporins [2]. This entry includes yeast family members such as Nup145p as well as vertebrate Nup98. The NUP C-terminal domains of Nup98 and Nup145 possess peptidase S59 autoproteolytic activity. The autoproteolytic sites of Nup98 and Nup145 each occur immediately C-terminal to the NUP C-terminal domain. Thus, although this domain occurs in the middle of each precursor polypeptide, it winds up at the C-terminal end of the N-terminal cleavage product. Cleavage of the peptide chains are necessary for the proper targeting to the nuclear pore [3].
Domain