7O3V | pdb_00007o3v

Stalk complex structure (TrwJ/VirB5-TrwI/VirB6) from the fully-assembled R388 type IV secretion system determined by cryo-EM.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AT4SSe7o3vA1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Typo IV secretion system protein TraC (From Topology)T: Typo IV secretion system protein TraCF: T4SSECOD (1.6)
BT4SSe7o3vB1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Typo IV secretion system protein TraC (From Topology)T: Typo IV secretion system protein TraCF: T4SSECOD (1.6)
CT4SSe7o3vC1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Typo IV secretion system protein TraC (From Topology)T: Typo IV secretion system protein TraCF: T4SSECOD (1.6)
DT4SSe7o3vD1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Typo IV secretion system protein TraC (From Topology)T: Typo IV secretion system protein TraCF: T4SSECOD (1.6)
ET4SSe7o3vE1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Typo IV secretion system protein TraC (From Topology)T: Typo IV secretion system protein TraCF: T4SSECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F, G, H, I, J
PF04610TrbL/VirB6 plasmid conjugal transfer protein (TrbL)TrbL/VirB6 plasmid conjugal transfer protein- Family

InterPro: Protein Family Classification InterPro Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM