Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like8092473 3002562 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like8092471 3000282 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like8092471 3000282 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like8092467 3001706 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like8092473 3002562 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCoronavirus S1 glycoprotein domain D-like8092663 3002616 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCoronavirus S1 glycoprotein domain C-like8092661 3002615 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCoronavirus S1 glycoprotein domain C-like8092661 3002615 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCoronavirus S2 glycoprotein stalk-like8092471 3000282 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySARS coronavirus receptor-binding domain-like8092467 3001706 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCoronavirus spike S2 glycoprotein connector domain-like8092473 3002562 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCoronavirus S1 glycoprotein domain D-like8092663 3002616 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe7t5oA1 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe7t5oB4 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe7t5oB3 A: beta complex topologyX: Beta domain of coronavirus spike glycoprotein (From Topology)H: Beta domain of coronavirus spike glycoprotein (From Topology)T: Beta domain of coronavirus spike glycoproteinF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe7t5oB2 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe7t5oB1 A: a+b complex topologyX: S2 subunit of coronavirus spike glycoprotein (From Topology)H: S2 subunit of coronavirus spike glycoprotein (From Topology)T: S2 subunit of coronavirus spike glycoproteinF: F_UNCLASSIFIEDECOD (1.6)
D [auth H]F_UNCLASSIFIEDe7t5oH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
E [auth L]F_UNCLASSIFIEDe7t5oL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D [auth H]Heavy ChainIGHV1 -spike glycoproteinSAbDab (2024-04-12)
E [auth L]Light ChainIGLV3 Lambdaspike glycoproteinSAbDab (2024-04-12)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Spike glycoprotein
D [auth H]GAR03 Fab heavy chain---
E [auth L]GAR03 Fab light chain---