Crystal structure of DgpA with glucose
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e7xr9A1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e7xr9A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e7xr9B2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e7xr9B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e7xr9C2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e7xr9C1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e7xr9D2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e7xr9D1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
E | F_UNCLASSIFIED | e7xr9E2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E | F_UNCLASSIFIED | e7xr9E1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
F | F_UNCLASSIFIED | e7xr9F1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | F_UNCLASSIFIED | e7xr9F2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
A | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
B | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
C | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
D | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
D | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
E | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
F | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01408 | Oxidoreductase family, NAD-binding Rossmann fold (GFO_IDH_MocA) | Oxidoreductase family, NAD-binding Rossmann fold | This entry represents the N-terminal domain of a group of enzymes that utilise NADP or NAD, known as the GFO/IDH/MOCA family, which includes enzymes that catalyse different chemical reactions such as oxidation and reduction of carbohydrates, oxidatio ... | Domain | |
PF02894 | Oxidoreductase family, C-terminal alpha/beta domain (GFO_IDH_MocA_C) | Oxidoreductase family, C-terminal alpha/beta domain | This family of enzymes utilise NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DgpA | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR052515 | Gfo/Idh/MocA Oxidoreductase | Family | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR004104 | Gfo/Idh/MocA-like oxidoreductase, C-terminal | Domain | |
IPR000683 | Gfo/Idh/MocA-like oxidoreductase, N-terminal | Domain |