7LC0 | pdb_00007lc0

Structure of D-Glucosaminate-6-phosphate Ammonia-lyase


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASelA_Ce7lc0A2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
ASelA_Ne7lc0A1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
BSelA_Ce7lc0B2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
BSelA_Ne7lc0B1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
CSelA_Ce7lc0C2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
CSelA_Ne7lc0C1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
ESelA_Ce7lc0E2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
ESelA_Ne7lc0E1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
FSelA_Ce7lc0F2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
FSelA_Ne7lc0F1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
HSelA_Ce7lc0H2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
HSelA_Ne7lc0H1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
GSelA_Ce7lc0G2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
GSelA_Ne7lc0G1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)
DSelA_Ce7lc0D2 A: a+b two layersX: C-terminal domain in some PLP-dependent transferases (From Topology)H: C-terminal domain in some PLP-dependent transferases (From Topology)T: C-terminal domain in some PLP-dependent transferasesF: SelA_CECOD (1.6)
DSelA_Ne7lc0D1 A: a/b three-layered sandwichesX: PLP-dependent transferases (From Topology)H: PLP-dependent transferases (From Topology)T: PLP-dependent transferasesF: SelA_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF03841L-seryl-tRNA selenium transferase (SelA)L-seryl-tRNA selenium transferaseDomain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR015424Pyridoxal phosphate-dependent transferaseHomologous Superfamily
A, B, C, D, E
IPR006337D-glucosaminate-6-phosphate ammonia lyase DgaE-likeFamily
A, B, C, D, E
IPR015421Pyridoxal phosphate-dependent transferase, major domainHomologous Superfamily
A, B, C, D, E
IPR018319L-seryl-tRNA selenium transferase-likeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D, E
LLP Parent Component: LYS

RESIDAA0119

PSI-MOD :  N6-pyridoxal phosphate-L-lysine MOD:00128
A, B, C, D, E
MSE Parent Component: MET

RESIDAA0119