8DVV | pdb_00008dvv

Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyRotamase-like 8034864 3000622 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRotamase-like 8034864 3000622 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRotamase-like 8034864 3000622 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRotamase-like 8034864 3000622 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00622SPRY domain (SPRY)SPRY domainSPRY Domain is named from SPla and the RYanodine Receptor and it is found in many eukaryotic proteins with a wide range of functions. It is a protein-interaction module involved in many important signalling pathways like RNA processing, regulation of ...SPRY Domain is named from SPla and the RYanodine Receptor and it is found in many eukaryotic proteins with a wide range of functions. It is a protein-interaction module involved in many important signalling pathways like RNA processing, regulation of histone H3 methylation, innate immunity or embryonic development [1,2,3,4]. It can be divided into 11 subfamilies based on amino acid sequence similarity or the presence of additional protein domains. The greater SPRY family is divided into the SPRY/B30.2 (which contains a PRY extension at the N-terminal) and SPRY-only sub-families which are preceded by a subdomain that is structurally similar to the PRY region [2]. SPRY/B30.2 structures revealed a bent beta-sandwich fold comprised of two beta-sheets. Distant homologues are domains in butyrophilin/ marenostrin/pyrin [1].
Domain
A, B, C, D
PF08454RyR and IP3R Homology associated (RIH_assoc)RyR and IP3R Homology associated- Repeat
A, B, C, D
PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1]. Domain
A, B, C, D
PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeat- Repeat
A, B, C, D
PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
A, B, C, D
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
A, B, C, D
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family
A, B, C, D
PF02026RyR domain (RyR)RyR domain- Family
E, F, G, H
PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomeraseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Ryanodine receptor 2
E, F, G, H
Peptidyl-prolyl cis-trans isomerase FKBP1B

InterPro: Protein Family Classification InterPro Database Homepage