8E7S | pdb_00008e7s

III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2B (2022-06-29)
W [auth a]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2B (2022-06-29)
W [auth a]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2B (2022-06-29)
X [auth b]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2B (2022-06-29)
X [auth b]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyISP domain 8040307 3000233 SCOP2B (2022-06-29)
Y [auth c]SCOP2B SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2B (2022-06-29)
Y [auth c]SCOP2B SuperfamilyISP domain 8040307 3000233 SCOP2B (2022-06-29)
AA [auth e]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2B (2022-06-29)
BA [auth f]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2B (2022-06-29)
FSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2B (2022-06-29)
CA [auth g]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2B (2022-06-29)
DA [auth h]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2B (2022-06-29)
EA [auth j]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2B (2022-06-29)
EA [auth j]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2B (2022-06-29)
I [auth J]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2B (2022-06-29)
FA [auth k]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like 8095115 3000653 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like 8095115 3000653 SCOP2B (2022-06-29)
GA [auth l]SCOP2B SuperfamilyCytochrome c 8040304 3000815 SCOP2B (2022-06-29)
GA [auth l]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyCytochrome c 8040304 3000815 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2B (2022-06-29)
JA [auth o]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like 8095567 3000671 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like 8095567 3000671 SCOP2B (2022-06-29)
LA [auth q]SCOP2B SuperfamilyCytochrome c oxidase subunit E 8095803 3001402 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyCytochrome c oxidase subunit E 8095803 3001402 SCOP2B (2022-06-29)
PA [auth u]SCOP2B SuperfamilyCytochrome c oxidase subunit h 8095569 3000395 SCOP2B (2022-06-29)
T [auth U]SCOP2B SuperfamilyCytochrome c oxidase subunit h 8095569 3000395 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe8e7sA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
W [auth a]F_UNCLASSIFIEDe8e7sa1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8e7sB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
X [auth b]F_UNCLASSIFIEDe8e7sb1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8e7sC2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8e7sC3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8e7sC1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
Y [auth c]F_UNCLASSIFIEDe8e7sc2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
Y [auth c]F_UNCLASSIFIEDe8e7sc1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: F_UNCLASSIFIEDECOD (1.6)
Y [auth c]F_UNCLASSIFIEDe8e7sc3 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
DF_UNCLASSIFIEDe8e7sD1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
Z [auth d]F_UNCLASSIFIEDe8e7sd1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
AA [auth e]F_UNCLASSIFIEDe8e7se1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
EF_UNCLASSIFIEDe8e7sE1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
BA [auth f]F_UNCLASSIFIEDe8e7sf1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
FF_UNCLASSIFIEDe8e7sF1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
CA [auth g]F_UNCLASSIFIEDe8e7sg1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
GF_UNCLASSIFIEDe8e7sG1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
DA [auth h]F_UNCLASSIFIEDe8e7sh1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
HF_UNCLASSIFIEDe8e7sH1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
EA [auth j]F_UNCLASSIFIEDe8e7sj2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
EA [auth j]F_UNCLASSIFIEDe8e7sj1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: F_UNCLASSIFIEDECOD (1.6)
I [auth J]F_UNCLASSIFIEDe8e7sJ1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: F_UNCLASSIFIEDECOD (1.6)
I [auth J]F_UNCLASSIFIEDe8e7sJ2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: F_UNCLASSIFIEDECOD (1.6)
FA [auth k]F_UNCLASSIFIEDe8e7sk1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: F_UNCLASSIFIEDECOD (1.6)
J [auth K]F_UNCLASSIFIEDe8e7sK1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: F_UNCLASSIFIEDECOD (1.6)
GA [auth l]F_UNCLASSIFIEDe8e7sl2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: F_UNCLASSIFIEDECOD (1.6)
GA [auth l]F_UNCLASSIFIEDe8e7sl1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
K [auth L]F_UNCLASSIFIEDe8e7sL1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: F_UNCLASSIFIEDECOD (1.6)
K [auth L]F_UNCLASSIFIEDe8e7sL2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
HA [auth m]F_UNCLASSIFIEDe8e7sm1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: F_UNCLASSIFIEDECOD (1.6)
L [auth M]F_UNCLASSIFIEDe8e7sM1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: F_UNCLASSIFIEDECOD (1.6)
IA [auth n]F_UNCLASSIFIEDe8e7sn1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: F_UNCLASSIFIEDECOD (1.6)
M [auth N]F_UNCLASSIFIEDe8e7sN1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: F_UNCLASSIFIEDECOD (1.6)
JA [auth o]F_UNCLASSIFIEDe8e7so1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: F_UNCLASSIFIEDECOD (1.6)
N [auth O]F_UNCLASSIFIEDe8e7sO1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: F_UNCLASSIFIEDECOD (1.6)
KA [auth p]F_UNCLASSIFIEDe8e7sp1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
KA [auth p]F_UNCLASSIFIEDe8e7sp2 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: F_UNCLASSIFIEDECOD (1.6)
O [auth P]F_UNCLASSIFIEDe8e7sP2 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
O [auth P]F_UNCLASSIFIEDe8e7sP1 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: F_UNCLASSIFIEDECOD (1.6)
LA [auth q]F_UNCLASSIFIEDe8e7sq1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: F_UNCLASSIFIEDECOD (1.6)
P [auth Q]F_UNCLASSIFIEDe8e7sQ1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: F_UNCLASSIFIEDECOD (1.6)
R [auth S]F_UNCLASSIFIEDe8e7sS1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: F_UNCLASSIFIEDECOD (1.6)
NA [auth s]F_UNCLASSIFIEDe8e7ss1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: F_UNCLASSIFIEDECOD (1.6)
OA [auth t]F_UNCLASSIFIEDe8e7st1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: F_UNCLASSIFIEDECOD (1.6)
S [auth T]F_UNCLASSIFIEDe8e7sT1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: F_UNCLASSIFIEDECOD (1.6)
PA [auth u]F_UNCLASSIFIEDe8e7su1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: F_UNCLASSIFIEDECOD (1.6)
T [auth U]F_UNCLASSIFIEDe8e7sU1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: F_UNCLASSIFIEDECOD (1.6)
RA [auth w]F_UNCLASSIFIEDe8e7sw1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: F_UNCLASSIFIEDECOD (1.6)
V [auth W]F_UNCLASSIFIEDe8e7sW1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (utative)
X [auth b]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (utative)
EA [auth j]1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (utative)
I [auth J]1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (utative)
FA [auth k]1.20.210.10 Mainly Alpha Up-down Bundle Cytochrome C Oxidase Chain ACATH (utative)
J [auth K]1.20.210.10 Mainly Alpha Up-down Bundle Cytochrome C Oxidase Chain ACATH (utative)
KA [auth p]2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (utative)
O [auth P]2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
W [auth a]		PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. Domain
A,
W [auth a]		PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
B,
X [auth b]		PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C,
Y [auth c]		PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
D,
Z [auth d]		PF09796Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10)Ubiquinol-cytochrome-c reductase complex subunit (QCR10)- Family
AA [auth e],
E		PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
BA [auth f],
F		PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
CA [auth g],
G		PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex [1]. This Pfam family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex.
Domain
DA [auth h],
H		PF02939UcrQ family (UcrQ)UcrQ family- Family
EA [auth j],
I [auth J]		PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
EA [auth j],
I [auth J]		PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain
FA [auth k],
J [auth K]		PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
GA [auth l],
K [auth L]		PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
IA [auth n],
M [auth N]		PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
JA [auth o],
N [auth O]		PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit IIIDomain
KA [auth p],
O [auth P]		PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domainDomain
KA [auth p],
O [auth P]		PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
LA [auth q],
P [auth Q]		PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va. Domain
PA [auth u],
T [auth U]		PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. Domain
RA [auth w],
V [auth W]		PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
W [auth a]		Cytochrome b-c1 complex subunit 1, mitochondrial
B,
X [auth b]		Cytochrome b-c1 complex subunit 2, mitochondrial
C,
Y [auth c]		Cytochrome b-c1 complex subunit Rieske, mitochondrial
D,
Z [auth d]		Cytochrome b-c1 complex subunit 10, mitochondrial-
AA [auth e],
E		Cytochrome b-c1 complex subunit 9, mitochondrial-
BA [auth f],
F		Cytochrome b-c1 complex subunit 7, mitochondrial-
CA [auth g],
G		Cytochrome b-c1 complex subunit 6, mitochondrial-
DA [auth h],
H		Cytochrome b-c1 complex subunit 8, mitochondrial
EA [auth j],
I [auth J]		Cytochrome b
FA [auth k],
J [auth K]		Cytochrome c oxidase subunit 1
GA [auth l],
K [auth L]		Cytochrome c1, heme protein, mitochondrial
HA [auth m],
L [auth M]		Cytochrome c oxidase subunit 8, mitochondrial
IA [auth n],
M [auth N]		Cytochrome c oxidase subunit 7, mitochondrial
JA [auth o],
N [auth O]		Cytochrome c oxidase subunit 3
KA [auth p],
O [auth P]		Cytochrome c oxidase subunit 2
LA [auth q],
P [auth Q]		Cytochrome c oxidase subunit 6, mitochondrial
MA [auth r],
Q [auth R]		Cytochrome c oxidase subunit 9, mitochondrial
NA [auth s],
R [auth S]		Cytochrome c oxidase subunit 13, mitochondrial
OA [auth t],
S [auth T]		Cytochrome c oxidase subunit 4, mitochondrial
PA [auth u],
T [auth U]		Cytochrome c oxidase subunit 12, mitochondrial
QA [auth v],
U [auth V]		Cytochrome c oxidase subunit 26, mitochondrial- -
RA [auth w],
V [auth W]		Cytochrome c oxidase subunit 5A, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
W [auth a]		IPR007863Peptidase M16, C-terminalDomain
A,
W [auth a]		IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
W [auth a]		IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A,
W [auth a]		IPR011765Peptidase M16, N-terminalDomain
B,
X [auth b]		IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
X [auth b]		IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B,
X [auth b]		IPR011765Peptidase M16, N-terminalDomain
B,
X [auth b]		IPR001431Peptidase M16, zinc-binding siteBinding Site
C,
Y [auth c]		IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
C,
Y [auth c]		IPR014349Rieske iron-sulphur proteinFamily
C,
Y [auth c]		IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
C,
Y [auth c]		IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
C,
Y [auth c]		IPR005805Rieske iron-sulphur protein, C-terminalDomain
C,
Y [auth c]		IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
C,
Y [auth c]		IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
D,
Z [auth d]		IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
AA [auth e],
E		IPR008027Cytochrome b-c1 complex subunit 9Family
AA [auth e],
E		IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
BA [auth f],
F		IPR003197Cytochrome b-c1 complex subunit 7Family
BA [auth f],
F		IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
CA [auth g],
G		IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
CA [auth g],
G		IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
DA [auth h],
H		IPR004205Cytochrome b-c1 complex subunit 8Family
DA [auth h],
H		IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
EA [auth j],
I [auth J]		IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
EA [auth j],
I [auth J]		IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
EA [auth j],
I [auth J]		IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
EA [auth j],
I [auth J]		IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
EA [auth j],
I [auth J]		IPR005798Cytochrome b/b6, C-terminalDomain
EA [auth j],
I [auth J]		IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
EA [auth j],
I [auth J]		IPR030689Cytochrome bFamily
EA [auth j],
I [auth J]		IPR005797Cytochrome b/b6, N-terminal domainDomain
FA [auth k],
J [auth K]		IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
FA [auth k],
J [auth K]		IPR000883Cytochrome c oxidase subunit IFamily
FA [auth k],
J [auth K]		IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
FA [auth k],
J [auth K]		IPR023616Cytochrome c oxidase-like, subunit I domainDomain
FA [auth k],
J [auth K]		IPR033944Cytochrome c oxidase subunit I domainDomain
GA [auth l],
K [auth L]		IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
GA [auth l],
K [auth L]		IPR002326Cytochrome c1Family
GA [auth l],
K [auth L]		IPR009056Cytochrome c-like domainDomain
GA [auth l],
K [auth L]		IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
HA [auth m],
L [auth M]		IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
HA [auth m],
L [auth M]		IPR004202Cytochrome c oxidase subunit VIIcFamily
IA [auth n],
M [auth N]		IPR014367Cytochrome c oxidase subunit VII, budding yeastFamily
IA [auth n],
M [auth N]		IPR039297Cytochrome c oxidase subunit VIIFamily
JA [auth o],
N [auth O]		IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
JA [auth o],
N [auth O]		IPR000298Cytochrome c oxidase subunit III-likeDomain
JA [auth o],
N [auth O]		IPR033945Cytochrome c oxidase subunit III domainDomain
JA [auth o],
N [auth O]		IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
JA [auth o],
N [auth O]		IPR024791Cytochrome c oxidase subunit IIIFamily
KA [auth p],
O [auth P]		IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
KA [auth p],
O [auth P]		IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
KA [auth p],
O [auth P]		IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
KA [auth p],
O [auth P]		IPR045187Cytochrome c/quinol oxidase subunit IIFamily
KA [auth p],
O [auth P]		IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
KA [auth p],
O [auth P]		IPR008972CupredoxinHomologous Superfamily
KA [auth p],
O [auth P]		IPR001505Copper centre Cu(A)Binding Site
KA [auth p],
O [auth P]		IPR014222Cytochrome c oxidase, subunit IIDomain
LA [auth q],
P [auth Q]		IPR003204Cytochrome c oxidase, subunit Va/VIFamily
LA [auth q],
P [auth Q]		IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
MA [auth r],
Q [auth R]		IPR014368Cytochrome c oxidase, subunit VIIa, fungalFamily
NA [auth s],
R [auth S]		IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
NA [auth s],
R [auth S]		IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
NA [auth s],
R [auth S]		IPR001349Cytochrome c oxidase, subunit VIaFamily
OA [auth t],
S [auth T]		IPR002124Cytochrome c oxidase, subunit VbFamily
OA [auth t],
S [auth T]		IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
PA [auth u],
T [auth U]		IPR003213Cytochrome c oxidase, subunit VIbFamily
PA [auth u],
T [auth U]		IPR036549Cytochrome c oxidase subunit 6B/Cytochrome c oxidase assembly factor 6-like superfamilyHomologous Superfamily
PA [auth u],
T [auth U]		IPR048280Cytochrome oxidase c subunit VIb-likeFamily
RA [auth w],
V [auth W]		IPR004203Cytochrome c oxidase subunit IV familyFamily
RA [auth w],
V [auth W]		IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicElectron transport chain complex IV (cytochrome c oxidase)Respiratory supercomplexes III-IV

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALElectron Transport Chain Supercomplexes (Respirasome)Electron Transport Chain (ETC) Super Complex III2IV2 with bound 4 UQ6 (ubiquinone)