CryoEM structure of PN45545 TCR-CD3 complex
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth F] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054845 | 3000071 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054845 | 3000071 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054849 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
H [auth B] | F_UNCLASSIFIED | e8es7B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth F] | F_UNCLASSIFIED | e8es7F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth F] | F_UNCLASSIFIED | e8es7F2 | A: extended segments | X: Glycophorin-A transmembrane domain (From Topology) | H: Glycophorin-A transmembrane domain (From Topology) | T: Glycophorin-A transmembrane domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth E] | F_UNCLASSIFIED | e8es7E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth E] | F_UNCLASSIFIED | e8es7E2 | A: extended segments | X: Glycophorin-A transmembrane domain (From Topology) | H: Glycophorin-A transmembrane domain (From Topology) | T: Glycophorin-A transmembrane domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth Z] | F_UNCLASSIFIED | e8es7Z1 | A: alpha duplicates or obligate multimers | X: Transmembrane domain of CD3 zeta chain (From Topology) | H: Transmembrane domain of CD3 zeta chain (From Topology) | T: Transmembrane domain of CD3 zeta chain | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth Y] | F_UNCLASSIFIED | e8es7Y1 | A: alpha duplicates or obligate multimers | X: Transmembrane domain of CD3 zeta chain (From Topology) | H: Transmembrane domain of CD3 zeta chain (From Topology) | T: Transmembrane domain of CD3 zeta chain | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth G] | PF16680 | T-cell surface glycoprotein CD3 delta chain (Ig_4) | T-cell surface glycoprotein CD3 delta chain | This is an immunoglobulin-like domain. It is found on the T-cell surface glycoprotein CD3 delta chain. CD3delta and CD3epsilon complex together as part of the T-cell receptor complex [1]. | Domain |
D [auth F], F [auth E] | PF16681 | Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain (Ig_5) | Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain | Ig_5 is an immunoglobulin domain found on T-cell surface glycoprotein CD3 epsilon chain. It forms a first-order complex with T-cell surface glycoprotein CD3 delta chain as part of the T-cell receptor complex [1]. | Domain |
C [auth D] | PF16680 | T-cell surface glycoprotein CD3 delta chain (Ig_4) | T-cell surface glycoprotein CD3 delta chain | This is an immunoglobulin-like domain. It is found on the T-cell surface glycoprotein CD3 delta chain. CD3delta and CD3epsilon complex together as part of the T-cell receptor complex [1]. | Domain |
A [auth Z], B [auth Y] | PF11628 | T-cell surface glycoprotein CD3 zeta chain (TCR_zetazeta) | T-cell surface glycoprotein CD3 zeta chain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Bitopic proteins | T-cell and B-cell receptor complexes | Pre-T-cell antigen receptor |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |