8FQC | pdb_00008fqc

Structure of baseplate with receptor binding complex of Agrobacterium phage Milano

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth E1],
S [auth a1],
U [auth f1],
V [auth g1]		PF07157DNA circularisation protein N-terminus (DNA_circ_N)DNA circularisation protein N-terminus- Family
C [auth F1],
D [auth G1],
W [auth h1],
X [auth i1]		PF04865Baseplate J-like protein (Baseplate_J)Baseplate J-like protein- Family
E [auth H1],
Y [auth j1]		PF04865Baseplate J-like protein (Baseplate_J)Baseplate J-like protein- Family
BA [auth m1],
F [auth I1],
H [auth K1],
Z [auth k1]		PF04865Baseplate J-like protein (Baseplate_J)Baseplate J-like protein- Family
N [auth U1],
T [auth e1]		PF07157DNA circularisation protein N-terminus (DNA_circ_N)DNA circularisation protein N-terminus- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C1]Baseplate hub protein, gp26- - -
LA [auth A]Baseplate Central Spike, gp27- - -
B [auth E1],
S [auth a1],
U [auth f1],
V [auth g1]		Tail-tube, gp21- - -
C [auth F1],
D [auth G1],
W [auth h1],
X [auth i1]		Baseplate Wedge 2 protein, gp29- - -
E [auth H1],
Y [auth j1]		Baseplate wedge 1, gp28- - -
BA [auth m1],
F [auth I1],
H [auth K1],
Z [auth k1]		Tail sheath protein, gp20- - -
AA [auth l1],
G [auth J1]		Baseplate Wedge 3 protein, gp30- - -
Tail Spike protein, gp124-
Short Tail Fibers, gp31- - -
N [auth U1],
T [auth e1]		Baseplate Centerpiece, gp25- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth F1],
D [auth G1],
W [auth h1],
X [auth i1]		IPR006949Baseplate protein J-likeDomain
E [auth H1],
Y [auth j1]		IPR010877Bacteriophage Mu, Baseplate protein gp46Family
IPR012334Pectin lyase foldHomologous Superfamily
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily
N [auth U1],
T [auth e1]		IPR009826DNA circulation, N-terminalDomain