8FWE | pdb_00008fwe

Neck structure of Agrobacterium phage Milano, C3 symmetry

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], BB [auth A], C [auth L], CA [auth l], CB [auth B], D [auth M], DA [auth m], DB [auth C], E [auth N], EA [auth n], EB [auth D], F [auth O], FA [auth o], FB [auth E], G [auth P], GA [auth p], GB [auth F], H [auth Q], HA [auth q], HB [auth G], I [auth R], IA [auth r], J [auth S], JA [auth s], K [auth T], KA [auth t], L [auth U], LA [auth u], M [auth V], MA [auth v], N [auth W], NA [auth w], O [auth X], OA [auth x], P [auth Y], PA [auth y], Q [auth Z], QA [auth z], R [auth a], RA [auth 1], S [auth b], SA [auth 2], T [auth c], TA [auth 3], U [auth d], UA [auth 4], V [auth e], VA [auth 5], W [auth f], WA [auth 6], X [auth g], XA [auth 7], Y [auth h], YA [auth 8], Z [auth i], ZA [auth 9]	PF17963	Bacterial Ig domain (Big_9)	Bacterial Ig domain	This entry represents a wide variety of bacterial Ig domains.	Domain
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	PF04860	Phage portal protein (Phage_portal)	Phage portal protein	-	Family
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	PF17963	Bacterial Ig domain (Big_9)	Bacterial Ig domain	This entry represents a wide variety of bacterial Ig domains.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], BB [auth A], C [auth L], CA [auth l], CB [auth B], D [auth M], DA [auth m], DB [auth C], E [auth N], EA [auth n], EB [auth D], F [auth O], FA [auth o], FB [auth E], G [auth P], GA [auth p], GB [auth F], H [auth Q], HA [auth q], HB [auth G], I [auth R], IA [auth r], J [auth S], JA [auth s], K [auth T], KA [auth t], L [auth U], LA [auth u], M [auth V], MA [auth v], N [auth W], NA [auth w], O [auth X], OA [auth x], P [auth Y], PA [auth y], Q [auth Z], QA [auth z], R [auth a], RA [auth 1], S [auth b], SA [auth 2], T [auth c], TA [auth 3], U [auth d], UA [auth 4], V [auth e], VA [auth 5], W [auth f], WA [auth 6], X [auth g], XA [auth 7], Y [auth h], YA [auth 8], Z [auth i], ZA [auth 9]	Collar sheath protein, gp13	-	-	-
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	Portal protein, gp7	-	-	viral capsid virion component
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	Neck 2 protein, gp15	-	-	-
FC [auth AS], HC [auth AT], PC [auth AW], RC [auth AX], VB [auth AQ], FC [auth AS], HC [auth AT], PC [auth AW], RC [auth AX], VB [auth AQ], XB [auth AR]	Tail-terminator protein, gp18	-	-	-
GC [auth AV], JC [auth Aa], QC [auth AY], TC [auth Ab], WB [auth AU], GC [auth AV], JC [auth Aa], QC [auth AY], TC [auth Ab], WB [auth AU], ZB [auth AZ]	Tail-tube, gp21	-	-	-
AC [auth R3], BC [auth S3], CC [auth T3], DC [auth U3], KC [auth R4], AC [auth R3], BC [auth S3], CC [auth T3], DC [auth U3], KC [auth R4], LC [auth S4], MC [auth T4], NC [auth U4], UC [auth R5], VC [auth S5], WC [auth T5], XC [auth U5]	Neck 1 protein, gp14	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	IPR006944	Bacteriophage/Gene transfer agent portal protein	Family
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	IPR008767	Bacteriophage SPP1, head-tail adaptor	Family
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	IPR038666	Bacteriophage SPP1, head-tail adaptor superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.