8H9V | pdb_00008h9v

Human ATP synthase state 3b (combined)


Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth 3]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
G [auth 2]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
F [auth 1]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
E [auth 8]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
D [auth 7]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
C [auth 6]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
B [auth 5]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
A [auth 4]1.20.20.10 Mainly Alpha Up-down Bundle F1FO ATP Synthase F1F0 ATP synthase subunit CCATH (utative)
X [auth F]2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
X [auth F]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
X [auth F]1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
Y [auth D]2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
Y [auth D]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
Y [auth D]1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
W [auth E]2.40.10.170 Mainly Beta Beta Barrel Thrombin, subunit H CATH (utative)
W [auth E]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
W [auth E]1.10.1140.10 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain Chain D, domain3CATH (utative)
AA [auth O]1.10.520.20 Mainly Alpha Orthogonal Bundle Peroxidase domain 1CATH (utative)
V [auth C]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
U [auth B]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
T [auth A]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
I [auth H]PF02823ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N)ATP synthase, Delta/Epsilon chain, beta-sandwich domainPart of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ...Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213).
Domain
I [auth H]PF21335Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain (ATPD_C_metazoa)Metazoan delta subunit of F1F0-ATP synthase, C-terminal domainF-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from animals (called epsilon in bacteria or chlorop ...F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from animals (called epsilon in bacteria or chloroplast ATPase), which interacts with subunit C from F0 which is important for connecting the rotor of F1 (gamma subunit) to the rotor of F0 C subunit). This entry represents the C-terminal alpha-helical domain which is likely to act as an inhibitor of ATPase activity [1-5].
Domain
M [auth N]PF00119ATP synthase A chain (ATP-synt_A)ATP synthase A chainDomain
O [auth Q]PF00895ATP synthase protein 8 (ATP-synt_8)ATP synthase protein 8- Family
W [auth E],
X [auth F],
Y [auth D]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
W [auth E],
X [auth F],
Y [auth D]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. Domain
W [auth E],
X [auth F],
Y [auth D]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain
Z [auth G]PF00231ATP synthase (ATP-synt)ATP synthaseDomain
PF05405Mitochondrial ATP synthase B chain precursor (ATP-synt_B) (Mt_ATP-synt_B)Mitochondrial ATP synthase B chain precursor (ATP-synt_B)- Family
J [auth I]PF04627Mitochondrial ATP synthase epsilon chain (ATP-synt_Eps)Mitochondrial ATP synthase epsilon chain- Family
AA [auth O]PF00213ATP synthase delta (OSCP) subunit (OSCP)ATP synthase delta (OSCP) subunit- Family
T [auth A],
U [auth B],
V [auth C]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
T [auth A],
U [auth B],
V [auth C]
PF00306ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C)ATP synthase alpha/beta chain, C terminal domainDomain
T [auth A],
U [auth B],
V [auth C]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain
R [auth T]PF05680ATP synthase E chain (ATP-synt_E)ATP synthase E chain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ATP synthase F(0) complex subunit C1, mitochondrial
I [auth H]ATP synthase subunit delta, mitochondrial
L [auth M]ATP synthase subunit d, mitochondrial
M [auth N]ATP synthase subunit a
O [auth Q]ATP synthase protein 8
P [auth R]ATP synthase subunit f, mitochondrial-
Q [auth S]ATP synthase subunit g, mitochondrial
S [auth L]ATP synthase-coupling factor 6, mitochondrial
W [auth E],
X [auth F],
Y [auth D]
ATP synthase subunit beta, mitochondrial
Z [auth G]ATP synthase subunit gamma, mitochondrial
N [auth P]ATP synthase subunit ATP5MJ, mitochondrial-
ATP synthase F(0) complex subunit B1, mitochondrial
J [auth I]ATP synthase subunit epsilon, mitochondrial
AA [auth O]ATP synthase subunit O, mitochondrial
T [auth A],
U [auth B],
V [auth C]
ATP synthase subunit alpha, mitochondrial
R [auth T]ATP synthase subunit e, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
I [auth H]IPR036794ATP synthase delta/epsilon subunit, C-terminal domain superfamilyHomologous Superfamily
I [auth H]IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalDomain
I [auth H]IPR001469ATP synthase, F1 complex, delta/epsilon subunitFamily
I [auth H]IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalHomologous Superfamily
I [auth H]IPR048937F1F0-ATP synthase delta subunit, C-terminal domain, metazoanDomain
L [auth M]IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialHomologous Superfamily
L [auth M]IPR008689ATP synthase, F0 complex, subunit D, mitochondrialFamily
M [auth N]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
M [auth N]IPR000568ATP synthase, F0 complex, subunit AFamily
M [auth N]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
M [auth N]IPR045083ATP synthase, F0 complex, subunit A, bacterial/mitochondriaFamily
O [auth Q]IPR039017ATP synthase protein 8, mammalsFamily
O [auth Q]IPR001421ATP synthase protein 8, metazoaFamily
P [auth R]IPR019344Mitochondrial F1-F0 ATP synthase subunit F, predictedFamily
Q [auth S]IPR016702ATP synthase, F0 complex, gamma subunit, metazoaFamily
Q [auth S]IPR006808ATP synthase F0 complex subunit G, mitochondrialFamily
S [auth L]IPR036204ATP synthase-coupling factor 6 superfamily, mitochondrialHomologous Superfamily
S [auth L]IPR008387ATP synthase-coupling factor 6, mitochondrialFamily
W [auth E],
X [auth F],
Y [auth D]
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
W [auth E],
X [auth F],
Y [auth D]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
W [auth E],
X [auth F],
Y [auth D]
IPR050053ATPase alpha/beta chainsFamily
W [auth E],
X [auth F],
Y [auth D]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
W [auth E],
X [auth F],
Y [auth D]
IPR003593AAA+ ATPase domainDomain
W [auth E],
X [auth F],
Y [auth D]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
W [auth E],
X [auth F],
Y [auth D]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
W [auth E],
X [auth F],
Y [auth D]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
W [auth E],
X [auth F],
Y [auth D]
IPR055190ATP synthase A/B type, C-terminal domainDomain
W [auth E],
X [auth F],
Y [auth D]
IPR005722ATP synthase, F1 complex, beta subunitFamily
Z [auth G]IPR023632ATP synthase, F1 complex, gamma subunit conserved siteConserved Site
Z [auth G]IPR000131ATP synthase, F1 complex, gamma subunitFamily
Z [auth G]IPR035968ATP synthase, F1 complex, gamma subunit superfamilyHomologous Superfamily
N [auth P]IPR012574ATP synthase subunit ATP5MJ, mitochondrialFamily
IPR008688ATP synthase, F0 complex, subunit B/MI25Family
IPR013837ATP synthase, F0 complex, subunit BFamily
J [auth I]IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialHomologous Superfamily
J [auth I]IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialFamily
AA [auth O]IPR020781ATPase, OSCP/delta subunit, conserved siteConserved Site
AA [auth O]IPR000711ATPase, OSCP/delta subunitFamily
AA [auth O]IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyHomologous Superfamily
T [auth A],
U [auth B],
V [auth C]
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyHomologous Superfamily
T [auth A],
U [auth B],
V [auth C]
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
T [auth A],
U [auth B],
V [auth C]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
T [auth A],
U [auth B],
V [auth C]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
T [auth A],
U [auth B],
V [auth C]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
T [auth A],
U [auth B],
V [auth C]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
T [auth A],
U [auth B],
V [auth C]
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
T [auth A],
U [auth B],
V [auth C]
IPR000793ATP synthase, alpha subunit, C-terminalDomain
T [auth A],
U [auth B],
V [auth C]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
T [auth A],
U [auth B],
V [auth C]
IPR005294ATP synthase, F1 complex, alpha subunitFamily
R [auth T]IPR008386ATP synthase, F0 complex, subunit E, mitochondrialFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP05496
I [auth H]PharosP30049
L [auth M]PharosO75947
M [auth N]PharosP00846
O [auth Q]PharosP03928
P [auth R]PharosP56134
Q [auth S]PharosO75964
S [auth L]PharosP18859
W [auth E],
X [auth F],
Y [auth D]
PharosP06576
Z [auth G]PharosP36542
N [auth P]PharosP56378
PharosP24539
J [auth I]PharosP56381
AA [auth O]PharosP48047
T [auth A],
U [auth B],
V [auth C]
PharosP25705
R [auth T]PharosP56385