8JLJ | pdb_00008jlj

T1AM-bound mTAAR1-Gs protein complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth Y]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain
C [auth R]PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
E [auth Y]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
mGs
C [auth R]Soluble cytochrome b562,Trace amine-associated receptor 1
D [auth S]ScFv16---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019775WD40 repeat, conserved siteConserved Site
IPR001632G-protein beta subunit, WD40 repeatsDomain
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR016346G-protein subunit beta 1-5Family
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
E [auth Y]IPR001770G-protein, gamma subunitFamily
E [auth Y]IPR015898G-protein, gamma subunit-like domainDomain
E [auth Y]IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000367G-protein alpha subunit, group SFamily
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001408G-protein alpha subunit, group IFamily
C [auth R]IPR010980Cytochrome c/b562Homologous Superfamily
C [auth R]IPR009155Cytochrome b562Family
C [auth R]IPR050569Trace Amine-Associated ReceptorFamily
C [auth R]IPR000276G protein-coupled receptor, rhodopsin-likeFamily
C [auth R]IPR009133Trace amine associated receptor 1Family
C [auth R]IPR009132Trace amine associated receptor familyFamily
C [auth R]IPR017452GPCR, rhodopsin-like, 7TMDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP62873
E [auth Y]PharosP59768
PharosP63096