8OIT | pdb_00008oit

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
YA [auth Bq]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
TA [auth Bl]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
EA [auth BV]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
BA [auth BS]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
AA [auth BR]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)
W [auth BN]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
R [auth BI]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
N [auth BE]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
N [auth BE]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
L [auth BC]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
L [auth BC]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
L [auth BC]PF00467KOW motif (KOW)KOW motif- Family
K [auth BB]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
K [auth BB]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
J [auth BA]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
J [auth BA]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
IA [auth BZ]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
IA [auth BZ]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
HA [auth BY]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
HA [auth BY]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
GA [auth BX]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1]. Domain
GA [auth BX]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
FA [auth BW]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
FA [auth BW]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
EA [auth BV]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
EA [auth BV]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
DA [auth BU]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
DA [auth BU]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
CA [auth BT]PF22892MRPL44 dsRNA-binding domain (DSRM_MRPL44)MRPL44 dsRNA-binding domainThis double stranded RNA-binding domain is found in the Large ribosomal subunit protein mL44 protein. Domain
CA [auth BT]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
CA [auth BT]PF22935Large ribosomal subunit protein mL44, endonuclease domain (RM44_endonuclase)Large ribosomal subunit protein mL44, endonuclease domainLarge ribosomal subunit protein mL44 (RM44) is a component of the 39S subunit of mitochondrial ribosome. It may play a role in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. This entry represents the endonuclease ( ...Large ribosomal subunit protein mL44 (RM44) is a component of the 39S subunit of mitochondrial ribosome. It may play a role in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. This entry represents the endonuclease (RNase III-like) domain [1-3].
Domain
BA [auth BS]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
BA [auth BS]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
AA [auth BR]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
AA [auth BR]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
Z [auth BQ]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
Z [auth BQ]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
Y [auth BP]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
X [auth BO]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
X [auth BO]PF22078Large ribosomal subunit protein bL9m C-terminal domain (Ribosomal_bL9m_C)Large ribosomal subunit protein bL9m C-terminal domainThis entry represents a presumed domain found at the C-terminal of the large ribosomal subunit protein bL9m (mitochondrial) from animals. This domain may adopt a similar fold than prokaryotic large ribosomal subunit protein bL9. Domain
W [auth BN]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding proteinDomain
W [auth BN]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
V [auth BM]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
V [auth BM]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
U [auth BL]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
U [auth BL]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
U [auth BL]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
T [auth BK]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
S [auth BJ]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
R [auth BI]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
Q [auth BH]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth BH]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
P [auth BG]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
O [auth BF]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
N [auth BE]39S ribosomal protein L28, mitochondrial
M [auth BD]39S ribosomal protein L27, mitochondrial
L [auth BC]39S ribosomal protein L24, mitochondrial
K [auth BB]39S ribosomal protein L23, mitochondrial
JB [auth Aa]Peptide chain release factor 1, mitochondrial
IB [auth AG]P-site Met-tRNA(Met)---
HB [auth Bz]39S ribosomal protein L51, mitochondrial
GB [auth By]39S ribosomal protein L50, mitochondrial-
FB [auth Bx]39S ribosomal protein L49, mitochondrial
EB [auth Bw]39S ribosomal protein L48, mitochondrial-
DB [auth Bv]39S ribosomal protein L46, mitochondrial
CB [auth Bu]39S ribosomal protein L45, mitochondrial
J [auth BA]39S ribosomal protein L22, mitochondrial
BB [auth Bt]39S ribosomal protein L44, mitochondrial
AB [auth Bs]Large ribosomal subunit protein mL43
ZA [auth Br]39S ribosomal protein L42, mitochondrial
YA [auth Bq]39S ribosomal protein L41, mitochondrial
XA [auth Bp]39S ribosomal protein L40, mitochondrial
WA [auth Bo]39S ribosomal protein L39, mitochondrial
VA [auth Bn]39S ribosomal protein L38, mitochondrial-
UA [auth Bm]39S ribosomal protein L37, mitochondrial
TA [auth Bl]39S ribosomal protein L36, mitochondrial
SA [auth Bj]39S ribosomal protein L1, mitochondrial
I [auth B9]CP Val-tRNA(Val)---
RA [auth Bi]39S ribosomal protein S30, mitochondrial
QA [auth Bh]39S ribosomal protein S18a, mitochondrial
PA [auth Bg]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
OA [auth Bf]Peptidyl-tRNA hydrolase ICT1, mitochondrial
NA [auth Be]Ribosomal protein 63, mitochondrial
MA [auth Bd]39S ribosomal protein L55, mitochondrial
LA [auth Bc]39S ribosomal protein L54, mitochondrial
KA [auth Bb]39S ribosomal protein L53, mitochondrial-
JA [auth Ba]39S ribosomal protein L52, mitochondrial
IA [auth BZ]39S ribosomal protein L21, mitochondrial
H [auth B8]16S rRNA---
HA [auth BY]39S ribosomal protein L20, mitochondrial
GA [auth BX]39S ribosomal protein L19, mitochondrial
FA [auth BW]39S ribosomal protein L18, mitochondrial
EA [auth BV]39S ribosomal protein L17, mitochondrial
DA [auth BU]39S ribosomal protein L16, mitochondrial
CA [auth BT]39S ribosomal protein L15, mitochondrial
BA [auth BS]39S ribosomal protein L14, mitochondrial
AA [auth BR]39S ribosomal protein L13, mitochondrial
Z [auth BQ]39S ribosomal protein L11, mitochondrial
Y [auth BP]39S ribosomal protein L10, mitochondrial
G [auth B7]E-site tRNA---
X [auth BO]39S ribosomal protein L9, mitochondrial
W [auth BN]39S ribosomal protein L4, mitochondrial
V [auth BM]39S ribosomal protein L3, mitochondrial
U [auth BL]39S ribosomal protein L2, mitochondrial
T [auth BK]39S ribosomal protein L35, mitochondrial
S [auth BJ]39S ribosomal protein L34, mitochondrial
R [auth BI]39S ribosomal protein L33, mitochondrial
Q [auth BH]39S ribosomal protein L32, mitochondrial
P [auth BG]39S ribosomal protein L30, mitochondrial
O [auth BF]39S ribosomal protein L47, mitochondrial
39S ribosomal protein L12, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
N [auth BE]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
N [auth BE]IPR026569Large ribosomal subunit protein bL28Family
N [auth BE]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
M [auth BD]IPR001684Large ribosomal subunit protein bL27Family
L [auth BC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth BC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth BC]IPR003256Large ribosomal subunit protein uL24Family
L [auth BC]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
L [auth BC]IPR005824KOWDomain
L [auth BC]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
K [auth BB]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
K [auth BB]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
K [auth BB]IPR013025Large ribosomal subunit protein uL23-likeFamily
JB [auth Aa]IPR050057Prokaryotic/Mitochondrial Release FactorFamily
JB [auth Aa]IPR000352Peptide chain release factor class IDomain
JB [auth Aa]IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
JB [auth Aa]IPR005139Peptide chain release factorDomain
HB [auth Bz]IPR019373Large ribosomal subunit protein mL51Family
GB [auth By]IPR018305Large ribosomal subunit protein mL50Family
FB [auth Bx]IPR007740Large ribosomal subunit protein mL49Family
EB [auth Bw]IPR027486Small ribosomal subunit protein uS10 domainDomain
EB [auth Bw]IPR027487Large ribosomal subunit protein mL48Family
EB [auth Bw]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
DB [auth Bv]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
DB [auth Bv]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
DB [auth Bv]IPR040008Large ribosomal subunit protein mL46Family
DB [auth Bv]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
CB [auth Bu]IPR032710NTF2-like domain superfamilyHomologous Superfamily
CB [auth Bu]IPR007379Tim44-like domainDomain
CB [auth Bu]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
J [auth BA]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
J [auth BA]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
J [auth BA]IPR001063Large ribosomal subunit protein uL22Family
BB [auth Bt]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
BB [auth Bt]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
BB [auth Bt]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
BB [auth Bt]IPR014720Double-stranded RNA-binding domainDomain
AB [auth Bs]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
AB [auth Bs]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
AB [auth Bs]IPR039927Large ribosomal subunit protein mL43Family
ZA [auth Br]IPR019346Large ribosomal subunit protein mL42Family
YA [auth Bq]IPR019189Large ribosomal subunit protein mL41Family
XA [auth Bp]IPR019192Large ribosomal subunit protein mL40Family
XA [auth Bp]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
WA [auth Bo]IPR012676TGS-likeHomologous Superfamily
WA [auth Bo]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
WA [auth Bo]IPR050062Proline-tRNA synthetaseFamily
WA [auth Bo]IPR004095TGSDomain
WA [auth Bo]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
VA [auth Bn]IPR036610PEBP-like superfamilyHomologous Superfamily
VA [auth Bn]IPR008914Phosphatidylethanolamine-binding proteinFamily
VA [auth Bn]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
UA [auth Bm]IPR052482Mitochondrial large ribosomal subunit mL37Family
UA [auth Bm]IPR010793Large ribosomal subunit protein mL37/mL65Family
TA [auth Bl]IPR000473Large ribosomal subunit protein bL36Family
TA [auth Bl]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
TA [auth Bl]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
SA [auth Bj]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
SA [auth Bj]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
SA [auth Bj]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
SA [auth Bj]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
RA [auth Bi]IPR039982Large ribosomal subunit protein mL65Family
RA [auth Bi]IPR010793Large ribosomal subunit protein mL37/mL65Family
QA [auth Bh]IPR001648Small ribosomal subunit protein bS18Family
QA [auth Bh]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
PA [auth Bg]IPR018472Large ribosomal subunit protein mL64Family
PA [auth Bg]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
OA [auth Bf]IPR052104Mitochondrial Release Factor mL62Family
OA [auth Bf]IPR000352Peptide chain release factor class IDomain
NA [auth Be]IPR016576Large ribosomal subunit protein mL63Family
MA [auth Bd]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
MA [auth Bd]IPR018615Large ribosomal subunit protein mL55Family
LA [auth Bc]IPR013870Large ribosomal subunit protein mL54Family
KA [auth Bb]IPR019716Large ribosomal subunit protein mL53Family
KA [auth Bb]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
JA [auth Ba]IPR034596Large ribosomal subunit protein mL52Family
IA [auth BZ]IPR028909Large ribosomal subunit protein bL21-likeFamily
IA [auth BZ]IPR001787Large ribosomal subunit protein bL21Family
IA [auth BZ]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
HA [auth BY]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
HA [auth BY]IPR005813Large ribosomal subunit protein bL20Family
GA [auth BX]IPR001857Large ribosomal subunit protein bL19Family
GA [auth BX]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
GA [auth BX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth BW]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
FA [auth BW]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
EA [auth BV]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
EA [auth BV]IPR000456Large ribosomal subunit protein bL17Family
DA [auth BU]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
DA [auth BU]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
DA [auth BU]IPR016180Large ribosomal subunit protein uL16 domainDomain
DA [auth BU]IPR047873Large ribosomal subunit protein uL16Family
CA [auth BT]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
CA [auth BT]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth BT]IPR030878Large ribosomal subunit protein uL15Family
CA [auth BT]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
BA [auth BS]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
BA [auth BS]IPR000218Large ribosomal subunit protein uL14Family
AA [auth BR]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
AA [auth BR]IPR005822Large ribosomal subunit protein uL13Family
AA [auth BR]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AA [auth BR]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
Z [auth BQ]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
Z [auth BQ]IPR000911Ribosomal protein uL11Family
Z [auth BQ]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
Z [auth BQ]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
Z [auth BQ]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
Z [auth BQ]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
Y [auth BP]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
Y [auth BP]IPR001790Large ribosomal subunit protein uL10Family
Y [auth BP]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
X [auth BO]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
X [auth BO]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
X [auth BO]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
X [auth BO]IPR056864Large ribosomal subunit protein bL9m, N-terminal domainDomain
X [auth BO]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
X [auth BO]IPR000244Large ribosomal subunit protein bL9Family
W [auth BN]IPR013005Large ribosomal subunit protein uL4-likeFamily
W [auth BN]IPR002136Large ribosomal subunit protein uL4Family
W [auth BN]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
V [auth BM]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
V [auth BM]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
V [auth BM]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
V [auth BM]IPR000597Large ribosomal subunit protein uL3Family
U [auth BL]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
U [auth BL]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth BL]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
U [auth BL]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
U [auth BL]IPR002171Large ribosomal subunit protein uL2Family
T [auth BK]IPR021137Large ribosomal subunit protein bL35-likeFamily
T [auth BK]IPR019338Large ribosomal subunit protein bL35mFamily
T [auth BK]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
S [auth BJ]IPR000271Large ribosomal subunit protein bL34Family
R [auth BI]IPR052008Mitochondrial ribosomal protein bL33Family
R [auth BI]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth BI]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
R [auth BI]IPR001705Large ribosomal subunit protein bL33Family
Q [auth BH]IPR002677Large ribosomal subunit protein bL32Family
Q [auth BH]IPR051991Mitochondrial ribosomal protein bL32Family
Q [auth BH]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
P [auth BG]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
P [auth BG]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
P [auth BG]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
O [auth BF]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
O [auth BF]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
N [auth BE]PharosQ13084
M [auth BD]PharosQ9P0M9
L [auth BC]PharosQ96A35
K [auth BB]PharosQ16540
JB [auth Aa]PharosO75570
HB [auth Bz]PharosQ4U2R6
GB [auth By]PharosQ8N5N7
FB [auth Bx]PharosQ13405
EB [auth Bw]PharosQ96GC5
CB [auth Bu]PharosQ9BRJ2
J [auth BA]PharosQ9NWU5
BB [auth Bt]PharosQ9H9J2
AB [auth Bs]PharosQ8N983
ZA [auth Br]PharosQ9Y6G3
YA [auth Bq]PharosQ8IXM3
XA [auth Bp]PharosQ9NQ50
WA [auth Bo]PharosQ9NYK5
UA [auth Bm]PharosQ9BZE1
TA [auth Bl]PharosQ9P0J6
SA [auth Bj]PharosQ9BYD6
RA [auth Bi]PharosQ9NP92
QA [auth Bh]PharosQ9NVS2
PA [auth Bg]PharosQ8TAE8
OA [auth Bf]PharosQ14197
NA [auth Be]PharosQ9BQC6
MA [auth Bd]PharosQ7Z7F7
LA [auth Bc]PharosQ6P161
JA [auth Ba]PharosQ86TS9
HA [auth BY]PharosQ9BYC9
GA [auth BX]PharosP49406
FA [auth BW]PharosQ9H0U6
EA [auth BV]PharosQ9NRX2
DA [auth BU]PharosQ9NX20
CA [auth BT]PharosQ9P015
BA [auth BS]PharosQ6P1L8
AA [auth BR]PharosQ9BYD1
Z [auth BQ]PharosQ9Y3B7
Y [auth BP]PharosQ7Z7H8
X [auth BO]PharosQ9BYD2
W [auth BN]PharosQ9BYD3
V [auth BM]PharosP09001
U [auth BL]PharosQ5T653
T [auth BK]PharosQ9NZE8
S [auth BJ]PharosQ9BQ48
R [auth BI]PharosO75394
Q [auth BH]PharosQ9BYC8
P [auth BG]PharosQ8TCC3
O [auth BF]PharosQ9HD33
PharosP52815

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
K [auth BB]AYA Parent Component: ALA

IB [auth AG]PSU Parent Component: U

IB [auth AG]RSQ Parent Component: C

AB [auth Bs]ACE RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
I [auth B9]1MA Parent Component: A

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

I [auth B9]2MG Parent Component: G

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

I [auth B9]PSU Parent Component: U

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

KA [auth Bb]AYA Parent Component: ALA

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

H [auth B8]1MA Parent Component: A

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

H [auth B8]OMG Parent Component: G

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

H [auth B8]OMU Parent Component: U

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

H [auth B8]PSU Parent Component: U

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

AA [auth BR]SAC Parent Component: SER

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354