8P5D | pdb_00008p5d

Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth LDD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
H [auth LD0]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
H [auth LD0]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
VB [auth SY0]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
TB [auth SW0]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
SB [auth SV0]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
RB [auth SU0]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
G [auth LCC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
QB [auth ST0]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
PB [auth SS0]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
NB [auth SQ0]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
MB [auth SP0]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
LB [auth SO0]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JB [auth SM0]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IB [auth SL0]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
IB [auth SL0]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
HB [auth SK0]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
F [auth LC0]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
GB [auth SJ0]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
FB [auth SI0]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
DB [auth SGG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
CB [auth SG0]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
BB [auth SFF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
AB [auth SF0]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
YA [auth SE0]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
YA [auth SE0]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
YA [auth SE0]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
XA [auth SDD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
WA [auth SD0]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
UA [auth SC0]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
UA [auth SC0]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
QA [auth SA0]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
OA [auth MD1]PF05907CXXC motif containing zinc binding protein, eukaryotic (CXXC_Zn-b_euk)CXXC motif containing zinc binding protein, eukaryotic- Family
NA [auth LZ0]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
MA [auth LY0]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
MA [auth LY0]PF00467KOW motif (KOW)KOW motif- Family
LA [auth LX0]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
KA [auth LW0]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
JA [auth LV0]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
IA [auth LU0]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
GA [auth LS0]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
FA [auth LR0]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
EA [auth LQ0]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
DA [auth LPP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
C [auth LA0]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
CA [auth LP0]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
BA [auth LOO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AA [auth LO0]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
Z [auth LN0]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Y [auth LMM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
W [auth LLL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
V [auth LL0]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
T [auth LJ0]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
T [auth LJ0]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
S [auth LII]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
R [auth LI0]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
Q [auth LHH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
P [auth LH0]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
N [auth LG0]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
M [auth LFF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeDomain
L [auth LF0]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
K [auth LEE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth LDD]60S ribosomal protein L31
H [auth LD0]60S ribosomal protein L5
WB [auth SZ0]40S ribosomal protein S25- -
VB [auth SY0]40s ribosomal protein s24
UB [auth SX0]uS12---
TB [auth SW0]40S ribosomal protein S15A
SB [auth SV0]Ribosomal protein S21E
RB [auth SU0]40S ribosomal protein S20- -
G [auth LCC]60S ribosomal protein L3 -
QB [auth ST0]40S Ribosomal protein S19
PB [auth SS0]40S ribosomal protein S18
OB [auth SR0]eS17---
NB [auth SQ0]40S ribosomal protein S16
MB [auth SP0]Ribosomal protein S19
LB [auth SO0]40S ribosomal protein S14
KB [auth SN0]40S ribosomal protein S13
JB [auth SM0]40S ribosomal protein S12- -
IB [auth SL0]40S ribosomal protein S11
HB [auth SK0]40S ribosomal protein S10 -
F [auth LC0]60S ribosomal protein L4
GB [auth SJ0]40S ribosomal protein S9
FB [auth SI0]40S ribosomal protein S8
EB [auth SH0]40S ribosomal protein S7
DB [auth SGG]Guanine nucleotide binding protein beta subunit - -
CB [auth SG0]40S ribosomal protein S6
BB [auth SFF]Ubiquitin/40s ribosomal protein S27a fusion
AB [auth SF0]40S ribosomal protein S5
ZA [auth SEE]eS30---
YA [auth SE0]40S ribosomal protein S4
XA [auth SDD]40S ribosomal protein S29
E [auth LB0]60S ribosomal protein L3
WA [auth SD0]40S ribosomal protein S3
VA [auth SCC]eS28---
UA [auth SC0]40S ribosomal protein S2
TA [auth SBB]eS27---
SA [auth SB0]eS1---
RA [auth SAA]40S ribosomal protein S26
QA [auth SA0]40S ribosomal protein S0
PA [auth S60]RNA 16S---
OA [auth MD1]DNL-type domain-containing protein- - -
NA [auth LZ0]60S ribosomal protein L27
D [auth LAA]uL15---
MA [auth LY0]60S ribosomal protein L26
LA [auth LX0]60S ribosomal protein L23a
KA [auth LW0]Ribosomal protein L24E- -
JA [auth LV0]Ribosomal protein L23
IA [auth LU0]60S ribosomal protein L22
HA [auth LT0]60s ribosomal protein L21
GA [auth LS0]60S ribosomal protein L20
FA [auth LR0]60S ribosomal protein L19
EA [auth LQ0]60S ribosomal protein L18
DA [auth LPP]60S ribosomal protein L37a
C [auth LA0]60S ribosomal protein L8
CA [auth LP0]60S ribosomal protein L17
BA [auth LOO]60S ribosomal protein L44
AA [auth LO0]Ribosomal protein L13A
Z [auth LN0]Ribosomal protein L15
Y [auth LMM]Ubiquitin
X [auth LM0]Transposase- - -
W [auth LLL]60S ribosomal protein L39
V [auth LL0]60S ribosomal protein L13
U [auth LJJ]eL37---
T [auth LJ0]60S ribosomal protein L11
B [auth L70]RNA 5S---
S [auth LII]60S ribosomal protein L36
R [auth LI0]S60 ribosomal protein L10
Q [auth LHH]Ribosomal L29 protein (Fragment),Ribosomal L29 protein (Fragment),Ribosomal L29 protein (Fragment),Ribosomal L29 protein
P [auth LH0]60S ribosomal protein L9
O [auth LGG]Ribosomal protein L34
N [auth LG0]60S ribosomal protein L8 -
M [auth LFF]60S ribosomal protein L35a
L [auth LF0]60S ribosomal protein L7
K [auth LEE]60S ribosomal protein L32
J [auth LE0]60S ribosomal protein L6
A [auth L50]RNA 28S---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth LDD]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
I [auth LDD]IPR000054Large ribosomal subunit protein eL31Family
H [auth LD0]IPR005485Large ribosomal subunit protein uL18, eukaryotic/archaealFamily
H [auth LD0]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
WB [auth SZ0]IPR004977Small ribosomal subunit protein eS25Family
VB [auth SY0]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
VB [auth SY0]IPR001976Small ribosomal subunit protein eS24Family
VB [auth SY0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth SW0]IPR000630Small ribosomal subunit protein uS8Family
TB [auth SW0]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
SB [auth SV0]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
SB [auth SV0]IPR001931Small ribosomal subunit protein eS21Family
RB [auth SU0]IPR027486Small ribosomal subunit protein uS10 domainDomain
RB [auth SU0]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
G [auth LCC]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
G [auth LCC]IPR039109Large ribosomal subunit protein eL30-likeFamily
G [auth LCC]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
QB [auth ST0]IPR001266Small ribosomal subunit protein eS19Family
QB [auth ST0]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QB [auth ST0]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
PB [auth SS0]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PB [auth SS0]IPR001892Small ribosomal subunit protein uS13Family
PB [auth SS0]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
NB [auth SQ0]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NB [auth SQ0]IPR000754Small ribosomal subunit protein uS9Family
NB [auth SQ0]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MB [auth SP0]IPR002222Small ribosomal subunit protein uS19Family
MB [auth SP0]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
MB [auth SP0]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
LB [auth SO0]IPR001971Small ribosomal subunit protein uS11Family
LB [auth SO0]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KB [auth SN0]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
KB [auth SN0]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth SN0]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
KB [auth SN0]IPR000589Small ribosomal subunit protein uS15Family
JB [auth SM0]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JB [auth SM0]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IB [auth SL0]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth SL0]IPR000266Small ribosomal subunit protein uS17Family
IB [auth SL0]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
HB [auth SK0]IPR037447Small ribosomal subunit protein eS10Family
HB [auth SK0]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
HB [auth SK0]IPR005326Plectin/eS10, N-terminalDomain
F [auth LC0]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC0]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC0]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
GB [auth SJ0]IPR002942RNA-binding S4 domainDomain
GB [auth SJ0]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
GB [auth SJ0]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GB [auth SJ0]IPR022801Small ribosomal subunit protein uS4Family
FB [auth SI0]IPR001047Small ribosomal subunit protein eS8Family
FB [auth SI0]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
EB [auth SH0]IPR000554Small ribosomal subunit protein eS7Family
DB [auth SGG]IPR045223Small ribosomal subunit protein RACK1-likeFamily
DB [auth SGG]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
DB [auth SGG]IPR001680WD40 repeatRepeat
DB [auth SGG]IPR019775WD40 repeat, conserved siteConserved Site
DB [auth SGG]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DB [auth SGG]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
CB [auth SG0]IPR001377Small ribosomal subunit protein eS6Family
BB [auth SFF]IPR002906Small ribosomal subunit protein eS31Domain
BB [auth SFF]IPR019956Ubiquitin domainDomain
BB [auth SFF]IPR019954Ubiquitin conserved siteConserved Site
BB [auth SFF]IPR050158Ubiquitin and ubiquitin-likeFamily
BB [auth SFF]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BB [auth SFF]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BB [auth SFF]IPR000626Ubiquitin-like domainDomain
BB [auth SFF]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
AB [auth SF0]IPR000235Small ribosomal subunit protein uS7Family
AB [auth SF0]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth SF0]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth SF0]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
YA [auth SE0]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth SE0]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth SE0]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth SE0]IPR002942RNA-binding S4 domainDomain
YA [auth SE0]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth SE0]IPR000876Small ribosomal subunit protein eS4Family
YA [auth SE0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth SE0]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth SE0]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth SE0]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
XA [auth SDD]IPR001209Small ribosomal subunit protein uS14Family
XA [auth SDD]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
XA [auth SDD]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
XA [auth SDD]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
E [auth LB0]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth LB0]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth LB0]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth LB0]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth LB0]IPR000597Large ribosomal subunit protein uL3Family
WA [auth SD0]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
WA [auth SD0]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
WA [auth SD0]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
WA [auth SD0]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
UA [auth SC0]IPR000851Small ribosomal subunit protein uS5Family
UA [auth SC0]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
UA [auth SC0]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
UA [auth SC0]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
UA [auth SC0]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
UA [auth SC0]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth SAA]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
RA [auth SAA]IPR000892Small ribosomal subunit protein eS26Family
QA [auth SA0]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
QA [auth SA0]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
QA [auth SA0]IPR001865Small ribosomal subunit protein uS2Family
OA [auth MD1]IPR008584CXXC motif containing zinc binding protein, eukaryoticFamily
NA [auth LZ0]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
NA [auth LZ0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth LZ0]IPR001141Large ribosomal subunit protein eL27Family
MA [auth LY0]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
MA [auth LY0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth LY0]IPR005824KOWDomain
MA [auth LY0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth LY0]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
MA [auth LY0]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
LA [auth LX0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LA [auth LX0]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LA [auth LX0]IPR013025Large ribosomal subunit protein uL23-likeFamily
KA [auth LW0]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
KA [auth LW0]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
JA [auth LV0]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth LV0]IPR000218Large ribosomal subunit protein uL14Family
IA [auth LU0]IPR002671Large ribosomal subunit protein eL22Family
IA [auth LU0]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
HA [auth LT0]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
HA [auth LT0]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
HA [auth LT0]IPR001147Large ribosomal subunit protein eL21Family
HA [auth LT0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GA [auth LS0]IPR028877Large ribosomal subunit protein eL20Family
GA [auth LS0]IPR023573Large ribosomal subunit protein eL20 domainDomain
GA [auth LS0]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
FA [auth LR0]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
FA [auth LR0]IPR039547Large ribosomal subunit protein eL19Family
FA [auth LR0]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
FA [auth LR0]IPR000196Large ribosomal subunit protein eL19 domainDomain
EA [auth LQ0]IPR021131Large ribosomal subunit protein uL15/eL18Domain
EA [auth LQ0]IPR000039Large ribosomal subunit protein eL18Family
EA [auth LQ0]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth LPP]IPR002674Large ribosomal subunit protein eL43Family
DA [auth LPP]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth LPP]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DA [auth LPP]IPR050522Eukaryotic ribosomal protein eL43Family
C [auth LA0]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth LA0]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth LA0]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth LA0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth LA0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth LA0]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth LA0]IPR002171Large ribosomal subunit protein uL2Family
CA [auth LP0]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
CA [auth LP0]IPR001063Large ribosomal subunit protein uL22Family
CA [auth LP0]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
BA [auth LOO]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
BA [auth LOO]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth LOO]IPR000552Large ribosomal subunit protein eL42Family
AA [auth LO0]IPR005822Large ribosomal subunit protein uL13Family
AA [auth LO0]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AA [auth LO0]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Z [auth LN0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth LN0]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Z [auth LN0]IPR000439Large ribosomal subunit protein eL15Family
Y [auth LMM]IPR001975Large ribosomal subunit protein eL40 domainDomain
Y [auth LMM]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
Y [auth LMM]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
Y [auth LMM]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth LMM]IPR000626Ubiquitin-like domainDomain
W [auth LLL]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
W [auth LLL]IPR000077Large ribosomal subunit protein eL39Family
V [auth LL0]IPR001380Large ribosomal subunit protein eL13Family
T [auth LJ0]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
T [auth LJ0]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
T [auth LJ0]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
T [auth LJ0]IPR002132Large ribosomal subunit protein uL5Family
S [auth LII]IPR000509Large ribosomal subunit protein eL36Family
S [auth LII]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
R [auth LI0]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
R [auth LI0]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
R [auth LI0]IPR016180Large ribosomal subunit protein uL16 domainDomain
R [auth LI0]IPR047873Large ribosomal subunit protein uL16Family
R [auth LI0]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
Q [auth LHH]IPR001854Large ribosomal subunit protein uL29Family
Q [auth LHH]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
P [auth LH0]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
P [auth LH0]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
P [auth LH0]IPR000702Large ribosomal subunit protein uL6-likeFamily
O [auth LGG]IPR008195Large ribosomal subunit protein eL34Family
O [auth LGG]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
O [auth LGG]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
N [auth LG0]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
N [auth LG0]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth LG0]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
N [auth LG0]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
N [auth LG0]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
M [auth LFF]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
M [auth LFF]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth LFF]IPR001780Large ribosomal subunit protein eL33Family
L [auth LF0]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
L [auth LF0]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
L [auth LF0]IPR039699Large ribosomal subunit protein uL30Family
L [auth LF0]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
L [auth LF0]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
K [auth LEE]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
K [auth LEE]IPR023654Large ribosomal subunit protein eL32, archaealFamily
K [auth LEE]IPR001515Large ribosomal subunit protein eL32Family
K [auth LEE]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
J [auth LE0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth LE0]IPR000915Large ribosomal subunit protein eL6Family